Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7f19
         (599 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094705-1|AAM11058.1|  923|Drosophila melanogaster GH11566p pro...    31   1.6  
AL009196-3|CAA15711.1|  923|Drosophila melanogaster EG:25E8.1 pr...    31   1.6  
AE014298-378|AAF45769.1|  923|Drosophila melanogaster CG2918-PA ...    31   1.6  
AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-P...    30   2.8  
AE014297-1483|AAF54782.2|  220|Drosophila melanogaster CG4115-PA...    29   6.4  
AF124744-1|AAD32858.1|  817|Drosophila melanogaster DNA replicat...    28   8.4  
AE014298-920|AAF46184.1|  817|Drosophila melanogaster CG4039-PA ...    28   8.4  
AB010108-1|BAA34732.1|  817|Drosophila melanogaster MCM6 protein.      28   8.4  

>AY094705-1|AAM11058.1|  923|Drosophila melanogaster GH11566p
           protein.
          Length = 923

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 437 ERISKPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPF 556
           E++++  K S ++L R + H   PE I  L+ M+D  E F
Sbjct: 734 EKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKF 773


>AL009196-3|CAA15711.1|  923|Drosophila melanogaster EG:25E8.1
           protein.
          Length = 923

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 437 ERISKPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPF 556
           E++++  K S ++L R + H   PE I  L+ M+D  E F
Sbjct: 734 EKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKF 773


>AE014298-378|AAF45769.1|  923|Drosophila melanogaster CG2918-PA
           protein.
          Length = 923

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = +2

Query: 437 ERISKPPKRSIIYLWREYAHTLPPETISRLRTMLDADEPF 556
           E++++  K S ++L R + H   PE I  L+ M+D  E F
Sbjct: 734 EKLAQLKKLSNVFLARHWEHEERPEAIKALKGMIDGAEKF 773


>AE014297-2422|AAF55479.3| 2938|Drosophila melanogaster CG33547-PA
            protein.
          Length = 2938

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/68 (27%), Positives = 31/68 (45%)
 Frame = +1

Query: 220  HGTSATVRSGHHHSWT*SSCATQIFAAQVREASTETGQTERSKGYGREISKARCPSPREM 399
            H T++T  S HH+S   S   +Q    Q+++      Q+ R KG     + +      E 
Sbjct: 2267 HNTTSTHNSNHHNSQASSVSVSQSHNQQLQQQQQLQQQSVRQKGKEGTTAISGSMMASEQ 2326

Query: 400  LTKAWCGT 423
            LTK+  G+
Sbjct: 2327 LTKSSSGS 2334


>AE014297-1483|AAF54782.2|  220|Drosophila melanogaster CG4115-PA
           protein.
          Length = 220

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 2   ILTNGRICKKKFCSNQSLTIEVIKGLFLIFI*RNMAETPTTNPSEFAPS 148
           I T+GR+C  K C    L    I G F     + +A T   N  +++P+
Sbjct: 104 IWTSGRLCDFKGCDRPDLQPTNINGWFWTATLQKLAPTTERNQGDWSPT 152


>AF124744-1|AAD32858.1|  817|Drosophila melanogaster DNA replication
           factor MCM6 protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8   TNGRICKKKFCSNQS-LTIEVIKGLFLIFI*RNMAETPTTNPSEFAPSELPV 160
           TN  IC+   CSN+    ++V K LFL F    + ET    P    P  + +
Sbjct: 169 TNPTICRNPVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEI 220


>AE014298-920|AAF46184.1|  817|Drosophila melanogaster CG4039-PA
           protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8   TNGRICKKKFCSNQS-LTIEVIKGLFLIFI*RNMAETPTTNPSEFAPSELPV 160
           TN  IC+   CSN+    ++V K LFL F    + ET    P    P  + +
Sbjct: 169 TNPTICRNPVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEI 220


>AB010108-1|BAA34732.1|  817|Drosophila melanogaster MCM6 protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 8   TNGRICKKKFCSNQS-LTIEVIKGLFLIFI*RNMAETPTTNPSEFAPSELPV 160
           TN  IC+   CSN+    ++V K LFL F    + ET    P    P  + +
Sbjct: 169 TNPTICRNPVCSNRKRFMLDVEKSLFLDFQKIRIQETQAELPRGCIPRAVEI 220


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,847,817
Number of Sequences: 53049
Number of extensions: 513727
Number of successful extensions: 1072
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)