Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7f14
(708 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 186 2e-47
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 33 0.20
U56965-11|AAB52666.1| 137|Caenorhabditis elegans Hypothetical p... 31 1.1
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 31 1.1
AL132898-8|CAB60959.1| 297|Caenorhabditis elegans Hypothetical ... 29 2.5
Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein. 29 3.3
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 29 4.3
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 29 4.3
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 29 4.3
AF026215-10|AAB71320.2| 971|Caenorhabditis elegans Hypothetical... 29 4.3
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z92785-5|CAB54232.2| 300|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81474-6|CAH04697.1| 320|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81474-3|CAB03903.3| 298|Caenorhabditis elegans Hypothetical pr... 28 7.5
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 28 7.5
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 28 7.5
AL021504-3|CAB54474.2| 300|Caenorhabditis elegans Hypothetical ... 28 7.5
AC199169-2|ABO33254.1| 319|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024882-6|AAF60925.2| 340|Caenorhabditis elegans Seven tm rece... 28 7.5
AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear recep... 27 9.9
AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear horm... 27 9.9
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 186 bits (452), Expect = 2e-47
Identities = 86/176 (48%), Positives = 124/176 (70%)
Frame = +1
Query: 85 EIPEHLRAIVDDPDPSFYRMVEYFYHNAVKVCEPSLEEYLKKYTHLSDKKRKQRVSGILK 264
++ + + + + +PSFY+MV+++++ +V P L E LK + LS K +K VSGIL
Sbjct: 27 QVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNS-LSQKDKKNLVSGILG 85
Query: 265 VMGSCNSSLQFEFPLQRKNGEYEMIHGYRSQHSVHRLPCKGGIRFSDQVNLEEVKALAAL 444
+ N L FP++R NGE+E+I +R+QHS HR P KGGIR+S V +EVKAL+AL
Sbjct: 86 AIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALSAL 145
Query: 445 MTYKCACSNIPFGGSKGGVAINPKQYTIAELQRITRRYTLELAKKNYIGAGIDVPS 612
MTYKCA ++PFGG+KGGV I+PKQYT E+++ITRR +E AKK ++G G+DVP+
Sbjct: 146 MTYKCAVVDVPFGGAKGGVKIDPKQYTDYEIEKITRRIAIEFAKKGFLGPGVDVPA 201
Score = 50.0 bits (114), Expect = 2e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +2
Query: 593 PASTFPAPDVNTSGREMSWIVDTYIKTLGYKDINAAAC 706
P PAPD+ T REM WI DTY +T+G+ D +A+AC
Sbjct: 195 PGVDVPAPDMGTGEREMGWIADTYAQTIGHLDRDASAC 232
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 73 VRRYEIPEHLRAIVDDPDPSFYRMVEYFYHNAVKVCEP 186
+ Y + ++RAIV + D +F+RM E+F +N V+ P
Sbjct: 1585 INYYPVQANIRAIVGNVDGNFHRMQEFFRNNIVRRAIP 1622
>U56965-11|AAB52666.1| 137|Caenorhabditis elegans Hypothetical
protein C15H9.9 protein.
Length = 137
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = +1
Query: 172 KVCEPSLEEYLKKYTHLSDKKRKQRVSGILKVMGSCNSSLQFEFPLQRKNGEYEMIHGYR 351
K C P E K + +K Q V G+L V+ C S + L++ IH Y+
Sbjct: 46 KTCTPLTEGTFKGNAAVGCRKITQSVEGVLSVVRECAYSGEPVDGLKKTGNHAIRIHYYQ 105
Query: 352 SQHSVHRLPC 381
++ PC
Sbjct: 106 CENEKAGTPC 115
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 115 DDPDPSFYRMVEY-FYHNAVKVCEPSLEEYLKKYTHLSDKKRKQRVSGILKVMGSCNSSL 291
D+ + VEY YH ++C+ +LE+Y+ + ++D K + + G C+S L
Sbjct: 151 DEKSDLLQKYVEYCHYHKGSEICK-NLEKYIAEKFPITDAKMSNVRAMVALPYGFCHSML 209
Query: 292 QF 297
F
Sbjct: 210 NF 211
>AL132898-8|CAB60959.1| 297|Caenorhabditis elegans Hypothetical
protein Y59A8B.11 protein.
Length = 297
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1
Query: 25 HKINLLNKLFNPVRLSVRRYEIPEHLRAIVDDPDPSFYRMVEYFYHN 165
HKI + K+ RLSVR+ + + RAIVD+ DP R+V +H+
Sbjct: 10 HKI--VEKVEPIERLSVRK--VCRNFRAIVDNKDPGIKRVVLNIHHS 52
>Z78419-7|CAC42290.1| 1601|Caenorhabditis elegans Hypothetical
protein F26A3.8 protein.
Length = 1601
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 130 SFYRMVEYFYHNAVKVCEPSLEEYLKKYTHLSDKKRKQRVSGILKVMGSCNSSLQFEFPL 309
+F ++ ++Y N ++CE +LE+ + HL D ++ R+ ILK + + Q +
Sbjct: 396 NFLEIIIWYYRNDNQLCEAALEDLV----HLIDGRK--RIGSILKCL---DKICQKREVM 446
Query: 310 QRKNG--EYEMIHGYRSQHSVHRLPCK 384
+ NG E E I GY+ V P +
Sbjct: 447 KLVNGLTEKESIEGYQRVRKVIFTPTR 473
>AF159144-1|AAF80368.1| 1601|Caenorhabditis elegans RRF-1 protein.
Length = 1601
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +1
Query: 130 SFYRMVEYFYHNAVKVCEPSLEEYLKKYTHLSDKKRKQRVSGILKVMGSCNSSLQFEFPL 309
+F ++ ++Y N ++CE +LE+ + HL D ++ R+ ILK + + Q +
Sbjct: 396 NFLEIIIWYYRNDNQLCEAALEDLV----HLIDGRK--RIGSILKCL---DKICQKREVM 446
Query: 310 QRKNG--EYEMIHGYRSQHSVHRLPCK 384
+ NG E E I GY+ V P +
Sbjct: 447 KLVNGLTEKESIEGYQRVRKVIFTPTR 473
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 316 KNGEYEMIHGYRSQHSVHRLP-CKGGIRFSDQVNLEEVKALAALMTYKCACSNIPFGGSK 492
KNG Y HS+HR CK G+ +D V ++KA + +C C ++
Sbjct: 62 KNGRIYCSQHYYKDHSIHRCAGCKKGVSPTDMV--YKLKA-GLVFHVECHCCSLCGRHLS 118
Query: 493 GG--VAINPKQYTIAELQRITRRYTLELAKKNYIGAGIDVPSTRREH 627
G + ++ T++ + + ++ IG+ +D+PS E+
Sbjct: 119 PGEQILVDDTMMTVSCMSHYPPQ--MDDNAPGAIGSAVDIPSCSTEN 163
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 316 KNGEYEMIHGYRSQHSVHRLP-CKGGIRFSDQVNLEEVKALAALMTYKCACSNIPFGGSK 492
KNG Y HS+HR CK G+ +D V ++KA + +C C ++
Sbjct: 70 KNGRIYCSQHYYKDHSIHRCAGCKKGVSPTDMV--YKLKA-GLVFHVECHCCSLCGRHLS 126
Query: 493 GG--VAINPKQYTIAELQRITRRYTLELAKKNYIGAGIDVPSTRREH 627
G + ++ T++ + + ++ IG+ +D+PS E+
Sbjct: 127 PGEQILVDDTMMTVSCMSHYPPQ--MDDNAPGAIGSAVDIPSCSTEN 171
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 316 KNGEYEMIHGYRSQHSVHRLP-CKGGIRFSDQVNLEEVKALAALMTYKCACSNIPFGGSK 492
KNG Y HS+HR CK G+ +D V ++KA + +C C ++
Sbjct: 62 KNGRIYCSQHYYKDHSIHRCAGCKKGVSPTDMV--YKLKA-GLVFHVECHCCSLCGRHLS 118
Query: 493 GG--VAINPKQYTIAELQRITRRYTLELAKKNYIGAGIDVPSTRREH 627
G + ++ T++ + + ++ IG+ +D+PS E+
Sbjct: 119 PGEQILVDDTMMTVSCMSHYPPQ--MDDNAPGAIGSAVDIPSCSTEN 163
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 28.7 bits (61), Expect = 4.3
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +1
Query: 316 KNGEYEMIHGYRSQHSVHRLP-CKGGIRFSDQVNLEEVKALAALMTYKCACSNIPFGGSK 492
KNG Y HS+HR CK G+ +D V ++KA + +C C ++
Sbjct: 70 KNGRIYCSQHYYKDHSIHRCAGCKKGVSPTDMV--YKLKA-GLVFHVECHCCSLCGRHLS 126
Query: 493 GG--VAINPKQYTIAELQRITRRYTLELAKKNYIGAGIDVPSTRREH 627
G + ++ T++ + + ++ IG+ +D+PS E+
Sbjct: 127 PGEQILVDDTMMTVSCMSHYPPQ--MDDNAPGAIGSAVDIPSCSTEN 171
>AF026215-10|AAB71320.2| 971|Caenorhabditis elegans Hypothetical
protein F09G2.1 protein.
Length = 971
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = -2
Query: 572 ASSKVYLLVILCSSAIVYCFGFIA-----TPPLEPPNGMLEQAHLYVIRAASAFTSSKFT 408
A +++ LL+ LC+ ++V C F A TP + PN M A+ +R SS +T
Sbjct: 5 AYARLLLLLHLCTVSLVLCDQFCATDGNDTPIITDPNYMCNDANFTNLRNPPLQNSSSYT 64
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 573 EEELYRCRHRRSQHPT*TRPVGRCPGSWTPTSRRL 677
EE YR H + P R C GSW P R L
Sbjct: 239 EETWYRVFHPNNNRPFRCRHDYMCGGSWVPRDRAL 273
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 573 EEELYRCRHRRSQHPT*TRPVGRCPGSWTPTSRRL 677
EE YR H + P R C GSW P R L
Sbjct: 239 EETWYRVFHPNNNRPFRCRHDYMCGGSWVPRDRAL 273
>Z92785-5|CAB54232.2| 300|Caenorhabditis elegans Hypothetical
protein F31E9.6 protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 166 AVKVCEPSLEEYLKKYTHLSDKKRKQRVS 252
A VCE + E+ KKY H +D +R + +S
Sbjct: 72 APDVCERRITEFQKKYAHGTDAQRLELLS 100
>Z81474-6|CAH04697.1| 320|Caenorhabditis elegans Hypothetical
protein C18D4.6c protein.
Length = 320
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 166 AVKVCEPSLEEYLKKYTHLSDKKRKQRVS 252
A VCE + E+ KKY H +D +R + +S
Sbjct: 72 APDVCERRITEFQKKYAHGTDDQRLELLS 100
>Z81474-3|CAB03903.3| 298|Caenorhabditis elegans Hypothetical
protein C18D4.6a protein.
Length = 298
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 166 AVKVCEPSLEEYLKKYTHLSDKKRKQRVS 252
A VCE + E+ KKY H +D +R + +S
Sbjct: 72 APDVCERRITEFQKKYAHGTDDQRLELLS 100
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 524 VYCFGFIATPPLEPPNGMLEQAHLYVIRAASAFTSSKFTWSENLM 390
V +++ PLE N LE+ Y+I F S+NLM
Sbjct: 306 VLLHAYLSRLPLESQNDALEEDQSYIITRILRFVEEMVNCSQNLM 350
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = -2
Query: 524 VYCFGFIATPPLEPPNGMLEQAHLYVIRAASAFTSSKFTWSENLM 390
V +++ PLE N LE+ Y+I F S+NLM
Sbjct: 306 VLLHAYLSRLPLESQNDALEEDQSYIITRILRFVEEMVNCSQNLM 350
>AL021504-3|CAB54474.2| 300|Caenorhabditis elegans Hypothetical
protein F31E9.6 protein.
Length = 300
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 166 AVKVCEPSLEEYLKKYTHLSDKKRKQRVS 252
A VCE + E+ KKY H +D +R + +S
Sbjct: 72 APDVCERRITEFQKKYAHGTDAQRLELLS 100
>AC199169-2|ABO33254.1| 319|Caenorhabditis elegans Hypothetical
protein F38A1.15 protein.
Length = 319
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 493 GGVAINPKQYTIAELQRITRRYTLELAKKNYIGAG 597
G ++ + ++TI+ ITR Y L + +N+IG+G
Sbjct: 181 GQISSSQHRFTISFYNTITRFYPLYVEVRNFIGSG 215
>AC024882-6|AAF60925.2| 340|Caenorhabditis elegans Seven tm
receptor protein 153 protein.
Length = 340
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 334 MIHGYRSQHSVHRLPCKGGIRFSDQVNLEEVKALAALMTYKCACSNIPFG 483
+I GYRS + +L +G ++ ++ ++ KAL A + P G
Sbjct: 220 LIFGYRSYKKISKLMAQGECDYTKRLQMQLYKALVAQTIIPMVLLSFPIG 269
>AF273836-1|AAG15184.1| 362|Caenorhabditis elegans nuclear receptor
NHR-92 protein.
Length = 362
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 136 YRMVEYFYHNAVKVCEPSLEEYLKKYTHLSDKKR 237
Y E N+ K P L++++K Y HL + +R
Sbjct: 90 YGKREITVKNSTKTASPILKDFVKNYEHLENVRR 123
>AC024776-15|AAK68482.2| 354|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 92 protein.
Length = 354
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 136 YRMVEYFYHNAVKVCEPSLEEYLKKYTHLSDKKR 237
Y E N+ K P L++++K Y HL + +R
Sbjct: 82 YGKREITVKNSTKTASPILKDFVKNYEHLENVRR 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,489,879
Number of Sequences: 27780
Number of extensions: 410166
Number of successful extensions: 1190
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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