Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7f10
         (699 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       27   0.17 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.6  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   3.7  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   3.7  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   4.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 348 ALRKENGEFEALELTPYSSPPDLPDVMKSQETNGQE 455
           A R++N E EA +      PP+LP+  KS   NG E
Sbjct: 136 AAREDNDEEEAQKPKEQYIPPELPNDEKSLFENGVE 171


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 336 VLDSEPLLC*RSGQIQPRSSHL 271
           +++ E LLC R  +IQ   SHL
Sbjct: 18  IVELEALLCRRDAEIQELRSHL 39


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  LKWKSEVVVFDNFISYAL*HFLL 78
           +KW  +VV F +   YAL   LL
Sbjct: 228 VKWTGKVVYFTSLFPYALLTILL 250


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 10  LKWKSEVVVFDNFISYAL*HFLL 78
           +KW  +VV F +   YAL   LL
Sbjct: 281 VKWTGKVVYFTSLFPYALLTILL 303


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = -3

Query: 79  IKENATRRTK*NYRKLQLQTSISVND 2
           ++ N    T+ NYR+++ + S+  ND
Sbjct: 384 MENNLRGETQSNYREMEKRQSVPAND 409


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,550
Number of Sequences: 438
Number of extensions: 4260
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)