Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7f05
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 58 1e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 58 1e-08
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 58 1e-08
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 56 5e-08
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 56 6e-08
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 54 2e-07
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 53 3e-07
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 52 7e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 51 2e-06
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 51 2e-06
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 51 2e-06
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 50 2e-06
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 50 3e-06
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 48 1e-05
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 46 4e-05
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 42 6e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 42 6e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 42 0.001
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 35 0.091
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 34 0.21
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 34 0.21
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 34 0.21
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 34 0.21
AE014296-1977|AAN11875.1| 491|Drosophila melanogaster CG32086-P... 30 2.6
BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p pro... 29 7.9
AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic ac... 29 7.9
AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic ac... 29 7.9
AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic ac... 29 7.9
AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic ac... 29 7.9
AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic ac... 29 7.9
AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic ac... 29 7.9
AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD... 29 7.9
AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE... 29 7.9
AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA... 29 7.9
AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB... 29 7.9
AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC... 29 7.9
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 58.0 bits (134), Expect = 1e-08
Identities = 40/165 (24%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Frame = +1
Query: 97 DVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSH-ERLAAQFQQALELGSLP-DFMTSGITY 270
+V V+++ KSPG DG+ + +K + +S + L+ G P D+ + I
Sbjct: 465 EVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVP 524
Query: 271 LIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTK 450
++ +P++YRPI+ L + K+L ++++++ + +N L Q G + G
Sbjct: 525 ILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTIL 584
Query: 451 DLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLEL 585
L + I + + +SK++V + +D + A+D+V H L+ L++
Sbjct: 585 PTLKLRNYIKESI-QSKQSVGLVTLDIEAAFDTVWHDGLLHKLKM 628
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 58.0 bits (134), Expect = 1e-08
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Frame = +1
Query: 133 KSPGPDGLHSYWIKWIRSSH--ERLAAQFQQALELGSLPDFMTSGITYLIYKSGNT-SDP 303
KSPG D + +K + S H +L F Q L G P S I I K SD
Sbjct: 452 KSPGADRVSYPMLKNL-SPHLKTKLLDIFNQILTTGKYPHTWRSAIIIPISKPNKPPSDI 510
Query: 304 KNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQ 483
+YRPI+ L + K L I+ ++ I +N++S NQ K+ + T D LL
Sbjct: 511 NSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVAFKS-NHSTMDALLRIQHFAS 569
Query: 484 QVRRSKRNVHMAWIDYKKAYDSVP-HTWLMRVLELYKINPILCSFLSSCM 630
+K +V + D+++A+D V H L R LE + I P L + + + M
Sbjct: 570 NALSTKNHVSILATDFERAFDRVGIHAVLCR-LERWGIGPRLYNLIKAFM 618
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 58.0 bits (134), Expect = 1e-08
Identities = 40/165 (24%), Positives = 84/165 (50%), Gaps = 2/165 (1%)
Frame = +1
Query: 97 DVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSH-ERLAAQFQQALELGSLP-DFMTSGITY 270
+V V+++ KSPG DG+ + +K + +S + L+ G P D+ + I
Sbjct: 413 EVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIVP 472
Query: 271 LIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTK 450
++ +P++YRPI+ L + K+L ++++++ + +N L Q G + G
Sbjct: 473 ILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGFRNGLNTIL 532
Query: 451 DLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLEL 585
L + I + + +SK++V + +D + A+D+V H L+ L++
Sbjct: 533 PTLKLRNYIKESI-QSKQSVGLVTLDIEAAFDTVWHDGLLHKLKM 576
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 56.0 bits (129), Expect = 5e-08
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 3/204 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSH---ERLAAQFQQALELGSLPDFMT 255
I+ +++S A++++ +PG + + IK SSH R+ F + + T
Sbjct: 433 ITYLELSSALQTLKGC-APGLNRISYQMIK--NSSHTTKNRITKLFNEIFNSHIPQAYKT 489
Query: 256 SGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAG 435
S I ++ + + + +YRPI+ I K+L I+ ++ + NN+++ Q G K G
Sbjct: 490 SLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGFKKG 549
Query: 436 SRGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINPILCSF 615
+ LL +D IT +SK + + +D+ +A+D V +++ L+ +K P + +
Sbjct: 550 KSTSDCLLYVDYLIT----KSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKIIKY 605
Query: 616 LSSCMGQWSTFLSQPGQMTSSAAP 687
+ + M + G TSS P
Sbjct: 606 IKNFMSN-RKITVRVGPHTSSPLP 628
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 55.6 bits (128), Expect = 6e-08
Identities = 47/187 (25%), Positives = 89/187 (47%), Gaps = 8/187 (4%)
Frame = +1
Query: 34 QTVRRECESYKEMD---SITISAV---DVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSH- 192
+++ R+ E Y E S+ +SAV +V + +P K+PG D L + I+ +
Sbjct: 415 ESLCRQVEEYLESPFQMSLPLSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQAL 474
Query: 193 ERLAAQFQQALELGSLPDFMTSGITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRI 369
+ LA F L++G P S +I+K+G T +D +YRP + LP++ K++ ++
Sbjct: 475 QFLALIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILN 534
Query: 370 KIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDS 549
++ + Q G + GT + L + + +K A++D ++A+D
Sbjct: 535 RLLTCKDVTKAIPKFQFGFRL-QHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDR 593
Query: 550 VPHTWLM 570
V H L+
Sbjct: 594 VWHPGLL 600
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 54.0 bits (124), Expect = 2e-07
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Frame = +1
Query: 34 QTVRRECESYKEMD---SITISAV---DVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSH- 192
+++ R+ E Y E S+ SAV +V + +P K+PG D L + I+ +
Sbjct: 217 ESLCRQVEEYLESPFQMSLPPSAVTLEEVKNLIAKLPLKKAPGEDLLDNRTIRLLPDQAL 276
Query: 193 ERLAAQFQQALELGSLPDFMTSGITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRI 369
+ L F L++G P S +I+K+G T +D +YRPI+ LP++ K++ ++
Sbjct: 277 QFLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILN 336
Query: 370 KIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDS 549
++ + Q G + GT + L + + +K A++D ++A+D
Sbjct: 337 RLLTCKDVTKAIPKFQFGFRL-QHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDR 395
Query: 550 VPHTWLM 570
V H L+
Sbjct: 396 VWHPGLL 402
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 53.2 bits (122), Expect = 3e-07
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 3/160 (1%)
Frame = +1
Query: 97 DVSRAVRSMPNWKSPGPDGLHSYWIKWI-RSSHERLAAQFQQALELGSLPDFMTSGITYL 273
+V+ + N K+PG D + + +K + R + + F + L P GI +
Sbjct: 440 EVAEVIVRQSNNKAPGHDVICNATLKALPRQAILYITLVFNAIVRLQYFPYQWKLGIISM 499
Query: 274 IYKSGNTS-DPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTK 450
I+K G +P +YRPI+ LP+I K+ ++ ++I + + I +Q G +AG +
Sbjct: 500 IHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGFRAGHCTVE 559
Query: 451 DL-LLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWL 567
L +++ +T SK + ++D ++A+D V H L
Sbjct: 560 QLHRVVEQILT--AYDSKEYCNSLFLDIREAFDRVWHIGL 597
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 52.0 bits (119), Expect = 7e-07
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIR-SSHERLAAQFQQALELGSLPDFMTSG 261
I ++ A++S+P KSPG D + + +K + + LA + L + P
Sbjct: 437 IRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIYNAILRVQFFPKQWKMA 496
Query: 262 ITYLIYKSGNTSD-PKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I+K G + P++YRPI+ L ++ KL ++ ++ + + IL +Q G + G
Sbjct: 497 AILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGFRQGH 556
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLM-RVLELY 588
+ + + I Q K + +ID ++A+D V H L+ +V +L+
Sbjct: 557 STVEQVHRLTKHILQAF-DDKEYCNAVFIDMQQAFDRVWHDGLISKVKKLF 606
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 50.8 bits (116), Expect = 2e-06
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L +G PD
Sbjct: 365 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 424
Query: 262 ITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + +DPK+YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 425 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 484
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 485 GTEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 535
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L +G PD
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 540
Query: 262 ITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + +DPK+YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 541 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 600
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 601 GTEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 651
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 50.8 bits (116), Expect = 2e-06
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L +G PD
Sbjct: 443 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 502
Query: 262 ITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + +DPK+YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 503 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 562
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 563 GTEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 613
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.8 bits (116), Expect = 2e-06
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L +G PD
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHA 540
Query: 262 ITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + +DPK+YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 541 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 600
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 601 GTEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 651
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 50.4 bits (115), Expect = 2e-06
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L +G PD
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKATLYLILIYNSILRIGYYPDAWKHA 540
Query: 262 ITYLIYKSGNT-SDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + +DPK+YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 541 QVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 600
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 601 GTEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 651
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 50.0 bits (114), Expect = 3e-06
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L LG P+
Sbjct: 493 ITLNELNEEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHA 552
Query: 262 ITYLIYKSGNTS-DPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G +S +PK+YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 553 QVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGFRKEH 612
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 613 GTEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 663
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 48.0 bits (109), Expect = 1e-05
Identities = 40/174 (22%), Positives = 80/174 (45%), Gaps = 2/174 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHER-LAAQFQQALELGSLPDFMTSG 261
I+ +++ ++++ N K+PG D + + IK + + L + L LG P+
Sbjct: 481 ITLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRLGYYPEAWKHA 540
Query: 262 ITYLIYKSGNTS-DPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G ++ +P++YRPI+ L + K+ +L ++ + +Q G +
Sbjct: 541 QVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGFRKEH 600
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINP 600
+ + + I + R K ++D +A+D V H L+ L+L KI P
Sbjct: 601 GSEQQIARVTQFILEAFER-KEYCSAVFLDISEAFDRVWHEGLL--LKLAKILP 651
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 46.4 bits (105), Expect = 4e-05
Identities = 36/151 (23%), Positives = 67/151 (44%)
Frame = +1
Query: 136 SPGPDGLHSYWIKWIRSSHERLAAQFQQALELGSLPDFMTSGITYLIYKSGNTSDPKNYR 315
SPGPDG+ + + S + L G+LP + T I K+ P+++R
Sbjct: 359 SPGPDGITPKSAREVPSGI--MLRIMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQDFR 416
Query: 316 PITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQVRR 495
PI+ + + L +IL ++ + I P Q G + ++D+ + + +
Sbjct: 417 PISVPSVLVRQLNAILATRLNSSI----NWDPRQRGFLPTDGCADNATIVDL-VLRHSHK 471
Query: 496 SKRNVHMAWIDYKKAYDSVPHTWLMRVLELY 588
R+ ++A +D KA+DS+ H + L Y
Sbjct: 472 HFRSCYIANLDVSKAFDSLSHASIYDTLRAY 502
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 42.3 bits (95), Expect = 6e-04
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Frame = +1
Query: 133 KSPGPDGLHSYW-IKWIRSSHERLAAQFQQALELGSLPDFMTSGITYLIYKSG-NTSDPK 306
KSPG D + I+ + + + F +LG P +I K G + + P
Sbjct: 448 KSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPS 507
Query: 307 NYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQ 486
+YRPI+ L + KL +L ++I H+ NN L +Q G + GT + + IT +
Sbjct: 508 SYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFRE-KHGTIEQV---NRITSE 563
Query: 487 VRRS---KRNVHMAWIDYKKAYDSVPHTWLMRVL-ELYKINP 600
+R + + ++D +A+D V WL +L ++ K+ P
Sbjct: 564 IRTAFEHREYCTAIFLDVAQAFDRV---WLDGLLFKIIKLLP 602
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 42.3 bits (95), Expect = 6e-04
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 6/162 (3%)
Frame = +1
Query: 133 KSPGPDGLHSYW-IKWIRSSHERLAAQFQQALELGSLPDFMTSGITYLIYKSG-NTSDPK 306
KSPG D + I+ + + + F +LG P +I K G + + P
Sbjct: 448 KSPGYDLITPRMLIELPKCAILHICLLFNAIAKLGYFPQKWKKSTIVMIPKPGKDKTQPS 507
Query: 307 NYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQ 486
+YRPI+ L + KL +L ++I H+ NN L +Q G + GT + + IT +
Sbjct: 508 SYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGFRE-KHGTIEQV---NRITSE 563
Query: 487 VRRS---KRNVHMAWIDYKKAYDSVPHTWLMRVL-ELYKINP 600
+R + + ++D +A+D V WL +L ++ K+ P
Sbjct: 564 IRTAFEHREYCTAIFLDVAQAFDRV---WLDGLLFKIIKLLP 602
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 41.5 bits (93), Expect = 0.001
Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 2/157 (1%)
Frame = +1
Query: 133 KSPGPDGLHSYWIKWIRSSHERLAAQFQQAL-ELGSLPDFMTSGITYLIYKSG-NTSDPK 306
KSPG D + I + S R + A+ +LG P +I K G N +
Sbjct: 450 KSPGYDLITPEMIIQLPHSAVRYITKLFNAITKLGYFPQRWKMMKIIMIPKPGKNHTVAS 509
Query: 307 NYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQ 486
+YRPI+ L I KL L I++ H +NI+ +Q G + S GT + + T +
Sbjct: 510 SYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGFRE-SHGTIEQVNRITTEIRT 568
Query: 487 VRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKIN 597
+ ++D +A+D V WL ++ KI+
Sbjct: 569 AFEYREYCTAVFLDVSQAFDKV---WLDGLMFKIKIS 602
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 35.1 bits (77), Expect = 0.091
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Frame = +1
Query: 196 RLAAQFQQALELGSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKI 375
R+ F ++G P I +I K +YRPI+ L + KL L ++I
Sbjct: 12 RICLLFNAITKIGYFPQKWKKSIIIMIPKPEKDKTQPSYRPISLLTCLSKLFEKGLLLRI 71
Query: 376 QNHIFNNNILSPNQNGCKAGSRGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVP 555
H+ +N L Q A + + I I + + ++D +A+D V
Sbjct: 72 SPHLKTHNTLPSYQFDFPAKHGAIEQVNRITTEI-RTAFEHREYCTALFLDVAQAFDRVW 130
Query: 556 HTWLM-RVLEL--YKINPILCSFL 618
LM ++++L I+ +L S+L
Sbjct: 131 LDGLMFKIIQLLPQNIHKLLKSYL 154
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 33.9 bits (74), Expect = 0.21
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHE-RLAAQFQQALELGSLPDFMTSG 261
++ +++ + S+ K+PG D L++ I + + L + L G P+
Sbjct: 37 VTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHA 96
Query: 262 ITYLIYKSGNTSDPKN-YRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + N YRPI+ L + KLL IL ++ + + +Q G +
Sbjct: 97 SISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDH 156
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINPILCSFL 618
L + I + K ++D +A+D V H L LYK++ ++ +L
Sbjct: 157 GAEHQLARVTQFILKAF-DEKDVCSATFLDITEAFDRVWHDGL-----LYKLSRLIPRYL 210
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.21
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHE-RLAAQFQQALELGSLPDFMTSG 261
++ +++ + S+ K+PG D L++ I + + L + L G P+
Sbjct: 484 VTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHA 543
Query: 262 ITYLIYKSGNTSDPKN-YRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + N YRPI+ L + KLL IL ++ + + +Q G +
Sbjct: 544 SISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGFRKDH 603
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINPILCSFL 618
L + I + K ++D +A+D V H L LYK++ ++ +L
Sbjct: 604 GAEHQLARVTQFILKAF-DEKDVCSATFLDITEAFDRVWHDGL-----LYKLSRLIPRYL 657
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.21
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHE-RLAAQFQQALELGSLPDFMTSG 261
++ +++ + S+ K+PG D L++ I + + L + L G P+
Sbjct: 484 VTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHA 543
Query: 262 ITYLIYKSGNTSDPKN-YRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + N YRPI+ L + KLL IL ++ + + +Q G +
Sbjct: 544 SISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDH 603
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINPILCSFL 618
L + I + K ++D +A+D V H L LYK++ ++ +L
Sbjct: 604 GAEHQLARVTQFILKAF-DEKDVCSATFLDITEAFDRVWHDGL-----LYKLSRLIPRYL 657
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 33.9 bits (74), Expect = 0.21
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 2/180 (1%)
Frame = +1
Query: 85 ISAVDVSRAVRSMPNWKSPGPDGLHSYWIKWIRSSHE-RLAAQFQQALELGSLPDFMTSG 261
++ +++ + S+ K+PG D L++ I + + L + L G P+
Sbjct: 484 VTLAELNGLINSLELKKAPGTDNLNNKTIINLPTKARIYLILIYNNILRTGHFPNKWKHA 543
Query: 262 ITYLIYKSGNTSDPKN-YRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGS 438
+I K G + N YRPI+ L + KLL IL ++ + + +Q G +
Sbjct: 544 SISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGFRKDH 603
Query: 439 RGTKDLLLIDMTITQQVRRSKRNVHMAWIDYKKAYDSVPHTWLMRVLELYKINPILCSFL 618
L + I + K ++D +A+D V H L LYK++ ++ +L
Sbjct: 604 GAEHQLARVTQFILKAF-DEKDVCSATFLDITEAFDRVWHDGL-----LYKLSRLIPRYL 657
>AE014296-1977|AAN11875.1| 491|Drosophila melanogaster CG32086-PA
protein.
Length = 491
Score = 30.3 bits (65), Expect = 2.6
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +1
Query: 280 KSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSPNQNGCKAGSRGTKDLL 459
K+GN + N ++CL T Y+LL + L+ K ++ N +S N G K + KDL+
Sbjct: 368 KTGNLT---NVSDVSCLDTTYRLLCADLQNKSKD---NTGAISQNLEGNKTTA---KDLI 418
Query: 460 LIDMTITQQVRRS 498
D+ I + + S
Sbjct: 419 TPDLAILRGLTHS 431
>BT011147-1|AAR82815.1| 508|Drosophila melanogaster GH15518p
protein.
Length = 508
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 206 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 261
>AJ554209-1|CAD86935.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorsubunit Dalpha6 protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AF321449-1|AAM13396.1| 523|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type V
protein.
Length = 523
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AF321448-1|AAM13395.1| 509|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type IV
protein.
Length = 509
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 207 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 262
>AF321447-1|AAM13394.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type III
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AF321446-1|AAM13393.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type II
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AF321445-1|AAM13392.1| 494|Drosophila melanogaster nicotinic
acetylcholine receptorDalpha6 subunit variant type I
protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AE014134-1706|AAS64672.1| 509|Drosophila melanogaster CG4128-PD,
isoform D protein.
Length = 509
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 207 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 262
>AE014134-1705|AAS64671.1| 523|Drosophila melanogaster CG4128-PE,
isoform E protein.
Length = 523
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AE014134-1704|AAF52817.3| 494|Drosophila melanogaster CG4128-PA,
isoform A protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AE014134-1703|AAS64670.1| 494|Drosophila melanogaster CG4128-PB,
isoform B protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
>AE014134-1702|AAN10709.2| 494|Drosophila melanogaster CG4128-PC,
isoform C protein.
Length = 494
Score = 28.7 bits (61), Expect = 7.9
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = +1
Query: 232 GSLPDFMTSGITYLIYKSGNTSDPKNYRPITCLPTIYKLLTSILRIKIQNHIFNNNILSP 411
G L DF+T+G YL+ G KN C P Y +T ++I+ + + N++ P
Sbjct: 192 GDLSDFITNGEWYLLAMPGK----KNTIVYACCPEPYVDITFTIQIRRRTLYYFFNLIVP 247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,441,013
Number of Sequences: 53049
Number of extensions: 709004
Number of successful extensions: 1891
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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