Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7f03
(693 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor ho... 163 7e-40
AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor... 162 9e-40
DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein. 109 7e-24
DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein. 107 5e-23
AY486334-1|AAS59410.1| 60|Homo sapiens splicing factor protein. 56 9e-08
L06155-1|AAC13541.1| 360|Homo sapiens melanocortin receptor pro... 31 3.9
BC098351-1|AAH98351.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
BC098169-1|AAH98169.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
BC096737-1|AAH96737.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
BC096702-1|AAH96702.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
BC069599-1|AAH69599.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
BC069105-1|AAH69105.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
AY227893-1|AAO72726.1| 360|Homo sapiens melanocortin 3 receptor... 31 3.9
AL139824-1|CAC15480.2| 323|Homo sapiens melanocortin 3 receptor... 31 3.9
BC064830-1|AAH64830.1| 603|Homo sapiens TAF2 protein protein. 30 9.0
BC047732-1|AAH47732.1| 604|Homo sapiens TAF2 protein protein. 30 9.0
BC035673-1|AAH35673.1| 604|Homo sapiens TAF2 protein protein. 30 9.0
AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor T... 30 9.0
AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein as... 30 9.0
AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator f... 30 9.0
>BC010634-1|AAH10634.1| 586|Homo sapiens SLU7 splicing factor
homolog (S. cerevisiae) protein.
Length = 586
Score = 163 bits (395), Expect = 7e-40
Identities = 72/105 (68%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 377 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAPWYYGTSG-PTLKHQRPQ 553
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S PWY S PTLKHQRPQ
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQ 88
Query: 554 EDREGQFTKLDKYYNKGVDVTKVATKFRKGACENCGAMTHKKKDC 688
+++ QF+ ++Y +GV V TK+RKGACENCGAMTHKKKDC
Sbjct: 89 PEKQKQFSSSGEWYKRGVKENSVITKYRKGACENCGAMTHKKKDC 133
>AF101074-1|AAD13774.1| 586|Homo sapiens step II splicing factor
SLU7 protein.
Length = 586
Score = 162 bits (394), Expect = 9e-40
Identities = 71/105 (67%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 377 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAPWYYGTSG-PTLKHQRPQ 553
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S PWY S PTLKHQRPQ
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQ 88
Query: 554 EDREGQFTKLDKYYNKGVDVTKVATKFRKGACENCGAMTHKKKDC 688
+++ QF+ ++Y +GV + TK+RKGACENCGAMTHKKKDC
Sbjct: 89 PEKQKQFSSSGEWYKRGVKENSIITKYRKGACENCGAMTHKKKDC 133
>DQ174517-1|ABA08383.1| 102|Homo sapiens Slu7 protein.
Length = 102
Score = 109 bits (263), Expect = 7e-24
Identities = 49/74 (66%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +2
Query: 377 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAPWYYGTS-GPTLKHQRPQ 553
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S PWY S PTLKHQRPQ
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQ 88
Query: 554 EDREGQFTKLDKYY 595
+++ QF+ ++Y
Sbjct: 89 PEKQKQFSSSGEWY 102
>DQ174516-1|ABA08382.1| 101|Homo sapiens Slu7 protein.
Length = 101
Score = 107 bits (256), Expect = 5e-23
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Frame = +2
Query: 377 SREDWRKAKELEEARKAGTAPAAVDETGKDINPHIPQYIASAPWYYGTS-GPTLKHQRPQ 553
+REDWRK KELEE RK G APA VDE GKDINPHIPQYI+S PWY S PTLKHQRPQ
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDINPHIPQYISSVPWYIDPSKRPTLKHQRPQ 88
Query: 554 EDREGQFT 577
+++ QF+
Sbjct: 89 PEKQKQFS 96
>AY486334-1|AAS59410.1| 60|Homo sapiens splicing factor protein.
Length = 60
Score = 56.4 bits (130), Expect = 9e-08
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +2
Query: 377 SREDWRKAKELEEARKAGTAPAAVDETGKDIN 472
+REDWRK KELEE RK G APA VDE GKDIN
Sbjct: 29 TREDWRKKKELEEQRKLGNAPAEVDEEGKDIN 60
>L06155-1|AAC13541.1| 360|Homo sapiens melanocortin receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC098351-1|AAH98351.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC098169-1|AAH98169.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC096737-1|AAH96737.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC096702-1|AAH96702.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC069599-1|AAH69599.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>BC069105-1|AAH69105.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>AY227893-1|AAO72726.1| 360|Homo sapiens melanocortin 3 receptor
protein.
Length = 360
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 298 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 340
>AL139824-1|CAC15480.2| 323|Homo sapiens melanocortin 3 receptor
protein.
Length = 323
Score = 31.1 bits (67), Expect = 3.9
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 667 HRTTVFTCPFPEFC-CYFCHINSFIVIFIELCELSLSVLLRPLMFKSRS 524
H + TCP +C CY H N+++V+ +C + ++ PL++ RS
Sbjct: 261 HLVLIITCPTNPYCICYTAHFNTYLVLI--MC----NSVIDPLIYAFRS 303
>BC064830-1|AAH64830.1| 603|Homo sapiens TAF2 protein protein.
Length = 603
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 201 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 52
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>BC047732-1|AAH47732.1| 604|Homo sapiens TAF2 protein protein.
Length = 604
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 201 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 52
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>BC035673-1|AAH35673.1| 604|Homo sapiens TAF2 protein protein.
Length = 604
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 201 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 52
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>AF057694-1|AAC13540.1| 1199|Homo sapiens TBP-associated factor
TAFII150 protein.
Length = 1199
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 201 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 52
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
>AF040701-1|AAC68502.1| 1189|Homo sapiens TATA binding protein
associated factor protein.
Length = 1189
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 201 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 52
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 27 NINFQRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 76
>AF026445-1|AAC02966.1| 1199|Homo sapiens cofactor of initiator
function protein.
Length = 1199
Score = 29.9 bits (64), Expect = 9.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = -1
Query: 201 NINFWVHNSLCLFDLFYF*TISTLKTEDISC*KCRFFLIRISCMNYNFIY 52
NINF + + +L F T++ L ++ +CR + +RI+ + FIY
Sbjct: 37 NINFHRKSVVGFVELTIFPTVANLNRIKLNSKQCRIYRVRINDLEAAFIY 86
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,203,948
Number of Sequences: 237096
Number of extensions: 1477466
Number of successful extensions: 3597
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3593
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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