Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7f01
         (713 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0692 - 22197582-22198214,22198761-22198935,22199089-221991...    32   0.39 
11_01_0106 - 792190-792730,793905-794018,794206-794540                 29   2.8  
01_04_0095 + 15979884-15980234                                         29   3.7  
10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977     29   4.8  
03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917...    28   6.4  
03_05_0935 - 28948368-28948769,28949028-28949120,28949240-289493...    28   8.5  

>12_02_0692 - 22197582-22198214,22198761-22198935,22199089-22199185,
            22199359-22199473,22199546-22199633,22199972-22200063,
            22200138-22200629,22201025-22201048,22201348-22203489
          Length = 1285

 Score = 32.3 bits (70), Expect = 0.39
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = +3

Query: 492  GPS--RPVLKSSGRRAEGGSARAYTTTLAAACSAHA*V-PIHPPLAPTVPIMLRAGARHP 662
            GPS   P +   G+RA  GSARA   ++    + +    P++    P V  ML  G+R P
Sbjct: 1208 GPSGASPAVNGGGKRAADGSARATARSVLKEVNRNTPTPPLNSMSVPKVRSMLGVGSRRP 1267

Query: 663  DAAECRSPVASTSRDD 710
               E    +     DD
Sbjct: 1268 AVLESVRRLEPFGSDD 1283


>11_01_0106 - 792190-792730,793905-794018,794206-794540
          Length = 329

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = +3

Query: 513 KSSGRRAEGGSARAYTTTLAAACSAHA*VPIHPPLAPTV-PIMLRAGARHPDAAECRSPV 689
           K + +R  GG A  YT    A  S H    I P L P +    +R    H   A   SP 
Sbjct: 166 KKTVQRNGGGGAAGYT---VAYISEHTCKSIEPSLPPVILDTTVRTTNNHQQPAAAESPA 222

Query: 690 ASTS 701
           A++S
Sbjct: 223 ATSS 226


>01_04_0095 + 15979884-15980234
          Length = 116

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -1

Query: 566 CRCICPCRSPLCSTTRRLEDRAR 498
           CRC CP  SP+ S   R   RAR
Sbjct: 30  CRCPCPGASPMASPCCRTRSRAR 52


>10_08_0118 + 14948636-14949667,14949893-14949953,14951226-14951977
          Length = 614

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 19/44 (43%), Positives = 23/44 (52%)
 Frame = -1

Query: 665 IRVPRARSQHDRDGWRERRVNRHLSVRRASSG*CRCICPCRSPL 534
           +RV  A     RDGW    V RH +V+    G  R +C CRSPL
Sbjct: 460 VRVIDADHGSGRDGWFSIEVARH-TVKDEIVGLRRHVC-CRSPL 501


>03_02_0955 -
           12690405-12690842,12690940-12691130,12691208-12691718,
           12692240-12693171,12693260-12693351,12693430-12693509,
           12693568-12693621,12693734-12693850,12693949-12694194,
           12694273-12694432,12694512-12694576,12694686-12694877,
           12694980-12695061,12695153-12695925
          Length = 1310

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3

Query: 558 TTTLAAACSAHA*VPIHPPLAPTVPIMLRAGARHPDAA 671
           + + AAA +A+   P   P  PT   +LR  +R P AA
Sbjct: 2   SASAAAAAAAYGTPPSQQPPPPTAESVLRVASRDPSAA 39


>03_05_0935 -
           28948368-28948769,28949028-28949120,28949240-28949329,
           28949413-28949477,28950442-28950512,28950610-28950648,
           28950832-28951250
          Length = 392

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 21/63 (33%), Positives = 26/63 (41%)
 Frame = -2

Query: 685 GERHSAASGCLAPALNMIGTVGASGG*IGT*ACAEQAAANVVVYARADPPSARRPDDLRT 506
           G R  AA+   A A + +    ASGG  G  A   +  A   + A     SARR    R 
Sbjct: 45  GARPGAAAAAAAAAADAVAASVASGGKKGKAAVVLRVPAGSPIVAARRQASARREIAARR 104

Query: 505 GRE 497
            RE
Sbjct: 105 ARE 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,439,707
Number of Sequences: 37544
Number of extensions: 295147
Number of successful extensions: 910
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)