Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7e18
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69383-3|CAA93409.1|  261|Caenorhabditis elegans Hypothetical pr...    32   0.30 
AC091125-8|AAP46267.1|  353|Caenorhabditis elegans Hypothetical ...    28   4.9  
AC091125-7|AAK27890.1|  510|Caenorhabditis elegans Hypothetical ...    28   4.9  

>Z69383-3|CAA93409.1|  261|Caenorhabditis elegans Hypothetical
           protein F13E9.6 protein.
          Length = 261

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 20/50 (40%), Positives = 30/50 (60%)
 Frame = -2

Query: 626 KFQLITFLLRLNITSSRFT*CNQLITFSNLLTSSYPLYIIFH*TEYVYNN 477
           K++LI F+ R NI S+ +  C+  +  S LLTS+  + I+FH T  V  N
Sbjct: 127 KWRLIEFI-RANIASNAYV-CSGFLENSPLLTSNQKVNILFHHTSLVIIN 174


>AC091125-8|AAP46267.1|  353|Caenorhabditis elegans Hypothetical
           protein Y67D2.1b protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 357 HANLPFCEILSKSTLSKYLQSFLIWQLIGCL 449
           HA+ PF E L +  + K LQSF+I   IG L
Sbjct: 222 HADRPFSEFLEQMGVGKTLQSFII-NTIGIL 251


>AC091125-7|AAK27890.1|  510|Caenorhabditis elegans Hypothetical
           protein Y67D2.1a protein.
          Length = 510

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +3

Query: 357 HANLPFCEILSKSTLSKYLQSFLIWQLIGCL 449
           HA+ PF E L +  + K LQSF+I   IG L
Sbjct: 222 HADRPFSEFLEQMGVGKTLQSFII-NTIGIL 251


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,307,056
Number of Sequences: 27780
Number of extensions: 272002
Number of successful extensions: 617
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 602
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)