BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7e16
(603 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029588-1|ABL75647.1| 245|Drosophila melanogaster IP16941p pro... 31 1.2
BT029630-1|ABL75689.1| 213|Drosophila melanogaster IP17141p pro... 31 1.6
AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p pro... 31 1.6
AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA... 31 1.6
AJ012576-1|CAA10062.1| 601|Drosophila melanogaster zinc finger ... 29 6.4
AF181647-1|AAD55433.1| 601|Drosophila melanogaster ken protein. 29 6.4
AE013599-3711|AAF47084.1| 601|Drosophila melanogaster CG5575-PA... 29 6.4
AB010261-4|BAA32687.1| 601|Drosophila melanogaster ken protein. 29 6.4
AB010260-1|BAA32683.1| 601|Drosophila melanogaster ken protein. 29 6.4
BT003535-1|AAO39539.1| 817|Drosophila melanogaster RE09158p pro... 28 8.5
AE014296-1279|AAF50544.2| 817|Drosophila melanogaster CG32372-P... 28 8.5
>BT029588-1|ABL75647.1| 245|Drosophila melanogaster IP16941p
protein.
Length = 245
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +3
Query: 366 NDSKCFTTKFTINATKTIFFFVLDSIGKGETTNIS**NRFMQKPELKSPEKIILCIFK-K 542
ND KC + K+ ++ F DS+ GE N+ N + KS E+ + I++ K
Sbjct: 144 NDLKCKSFKWYLDNIYPELFIPGDSVAHGEIANVP--NGMCLDAKEKSEEETPVSIYECK 201
Query: 543 KRSTRWHQFGF 575
++ R H+F F
Sbjct: 202 RKIRRGHRFPF 212
>BT029630-1|ABL75689.1| 213|Drosophila melanogaster IP17141p
protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +3
Query: 366 NDSKCFTTKFTINATKTIFFFVLDSIGKGETTNIS**NRFMQKPELKSPEKIILCIFKKK 545
ND KC + K+ ++ F DS+ GE N+ N + KS E+ + I++ K
Sbjct: 144 NDLKCKSFKWYLDNIYPELFIPGDSVAHGEIANVP--NGMCLDAKEKSEEETPVSIYECK 201
Query: 546 RSTRWHQFGF 575
R R GF
Sbjct: 202 RKIRRGNTGF 211
>AY122183-1|AAM52695.1| 1380|Drosophila melanogaster LD40412p
protein.
Length = 1380
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 358 RMSMIPNVLRQNLLSTLLKQFFFLSWIRLGKAKLQTYPNKID 483
RM P+V+ Q L++ LLKQ F SW+ A + P+K D
Sbjct: 839 RMCQAPDVIAQQLVTALLKQ-FNESWLVKEAAAIVPSPDKAD 879
>AE014297-4410|AAF56915.1| 1380|Drosophila melanogaster CG1911-PA
protein.
Length = 1380
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 358 RMSMIPNVLRQNLLSTLLKQFFFLSWIRLGKAKLQTYPNKID 483
RM P+V+ Q L++ LLKQ F SW+ A + P+K D
Sbjct: 839 RMCQAPDVIAQQLVTALLKQ-FNESWLVKEAAAIVPSPDKAD 879
>AJ012576-1|CAA10062.1| 601|Drosophila melanogaster zinc finger
protein protein.
Length = 601
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 342 IRGLMSHVNDSKCFTTKFTINATKTIFFFVLDSIGKGET 458
IR L+ + S C TT + + T F F+LD + G+T
Sbjct: 59 IRNLLEDTHLSDCSTTVYFPDVNATYFKFLLDFLYSGQT 97
>AF181647-1|AAD55433.1| 601|Drosophila melanogaster ken protein.
Length = 601
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 342 IRGLMSHVNDSKCFTTKFTINATKTIFFFVLDSIGKGET 458
IR L+ + S C TT + + T F F+LD + G+T
Sbjct: 59 IRNLLEDTHLSDCSTTVYFPDVNATYFKFLLDFLYSGQT 97
>AE013599-3711|AAF47084.1| 601|Drosophila melanogaster CG5575-PA
protein.
Length = 601
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 342 IRGLMSHVNDSKCFTTKFTINATKTIFFFVLDSIGKGET 458
IR L+ + S C TT + + T F F+LD + G+T
Sbjct: 59 IRNLLEDTHLSDCSTTVYFPDVNATYFKFLLDFLYSGQT 97
>AB010261-4|BAA32687.1| 601|Drosophila melanogaster ken protein.
Length = 601
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 342 IRGLMSHVNDSKCFTTKFTINATKTIFFFVLDSIGKGET 458
IR L+ + S C TT + + T F F+LD + G+T
Sbjct: 59 IRNLLEDTHLSDCSTTVYFPDVNATYFKFLLDFLYSGQT 97
>AB010260-1|BAA32683.1| 601|Drosophila melanogaster ken protein.
Length = 601
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 342 IRGLMSHVNDSKCFTTKFTINATKTIFFFVLDSIGKGET 458
IR L+ + S C TT + + T F F+LD + G+T
Sbjct: 59 IRNLLEDTHLSDCSTTVYFPDVNATYFKFLLDFLYSGQT 97
>BT003535-1|AAO39539.1| 817|Drosophila melanogaster RE09158p
protein.
Length = 817
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 391 FVVKHLESLTCDIKPLISSC*SESQK 314
+ V HL SL C ++P IS C E+ K
Sbjct: 6 YTVFHLASLQCSVRPEISPCTCETGK 31
>AE014296-1279|AAF50544.2| 817|Drosophila melanogaster CG32372-PA
protein.
Length = 817
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 391 FVVKHLESLTCDIKPLISSC*SESQK 314
+ V HL SL C ++P IS C E+ K
Sbjct: 6 YTVFHLASLQCSVRPEISPCTCETGK 31
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,211,962
Number of Sequences: 53049
Number of extensions: 356912
Number of successful extensions: 951
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2462276481
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -