Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7e13
         (713 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-20|AAK18863.1|  796|Caenorhabditis elegans Worm armadillo...    31   1.1  
AF013951-1|AAC47748.1|  796|Caenorhabditis elegans wrm-1 protein.      31   1.1  
AF098996-4|AAC68705.1|  888|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U32305-20|AAK18863.1|  796|Caenorhabditis elegans Worm armadillo
           protein 1 protein.
          Length = 796

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +3

Query: 297 NPRYYRPSPGYLYLEDWTKNPFTWLHYVESSDGLLVE 407
           NPR++      L L + T NPF WL + E SDG+L E
Sbjct: 683 NPRFFHSLK--LVLTNGTLNPFQWLTH-EMSDGILQE 716


>AF013951-1|AAC47748.1|  796|Caenorhabditis elegans wrm-1 protein.
          Length = 796

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/37 (45%), Positives = 22/37 (59%)
 Frame = +3

Query: 297 NPRYYRPSPGYLYLEDWTKNPFTWLHYVESSDGLLVE 407
           NPR++      L L + T NPF WL + E SDG+L E
Sbjct: 683 NPRFFHSLK--LVLTNGTLNPFQWLTH-EMSDGILQE 716


>AF098996-4|AAC68705.1|  888|Caenorhabditis elegans Hypothetical
           protein T11F1.8 protein.
          Length = 888

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -1

Query: 581 NLRCCVRFPQSVSQATGQLQIWILMSE*YFFTVKVTEEIPLHVMN*PI 438
           NL C   +  S+   +    I IL    +FF   +T E P HV N PI
Sbjct: 110 NLECMANYGISIINNSKLFNIDILNH--FFFVSVITNECPFHVANNPI 155


>Z81134-4|CAB03451.1|  322|Caenorhabditis elegans Hypothetical
           protein T28D6.7 protein.
          Length = 322

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 486 CEKILFTHQYPNLKLPSRLGNTLWKTNTATKVLPKLY 596
           CE I  +H  P  KLP+ L N + K   A KV+ KL+
Sbjct: 217 CEVIYISHSDPKGKLPTWLVNRVTKV-VAPKVIKKLH 252


>Z75714-6|CAE54930.1|  532|Caenorhabditis elegans Hypothetical
           protein ZC434.9b protein.
          Length = 532

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 503 HSSISKFEVAQSLGKHFVENEHSNEGFAKIIFERI*SIPGSNFKENGF 646
           +S+IS   + + +GK  +E EH    F+ ++F +     G N    GF
Sbjct: 91  NSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRMHNEGGNRARYGF 138


>Z75714-5|CAB00065.2|  581|Caenorhabditis elegans Hypothetical
           protein ZC434.9a protein.
          Length = 581

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 503 HSSISKFEVAQSLGKHFVENEHSNEGFAKIIFERI*SIPGSNFKENGF 646
           +S+IS   + + +GK  +E EH    F+ ++F +     G N    GF
Sbjct: 91  NSNISYDVIIEDVGKLILEKEHGPPRFSNLLFSKRMHNEGGNRARYGF 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,105,349
Number of Sequences: 27780
Number of extensions: 308003
Number of successful extensions: 652
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)