Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7d22
         (467 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92789-5|CAB07217.1|  397|Caenorhabditis elegans Hypothetical pr...    31   0.54 
U40414-5|AAA81408.2|  339|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical pr...    29   1.7  
AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical...    29   1.7  
AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical...    29   1.7  
AC025716-10|AAK39607.1|  474|Caenorhabditis elegans Hypothetical...    27   6.7  

>Z92789-5|CAB07217.1|  397|Caenorhabditis elegans Hypothetical
           protein H02I12.3 protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 0.54
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -3

Query: 276 CSYNFNRRKYVAVTMFLLFNLPI 208
           CS+NF RR    +T+FL+F LP+
Sbjct: 196 CSFNFYRRFPFRITIFLIFMLPL 218


>U40414-5|AAA81408.2|  339|Caenorhabditis elegans Hypothetical
           protein F53B3.5 protein.
          Length = 339

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 73  YNTYKGEGTFPYYNK 117
           YNTY G G +PYYN+
Sbjct: 285 YNTYAGYGGYPYYNQ 299


>Z81083-4|CAB03102.1|  645|Caenorhabditis elegans Hypothetical
           protein F44F1.5 protein.
          Length = 645

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -3

Query: 294 IVYKRKCSYNFNRRKYVAVTMFLLFNLPIYLRSQCLRT-FRLSPNSPAGTP 145
           +V K   SYNF+ R       FL+F+LPI+L ++C+ +  R   N    TP
Sbjct: 574 VVNKYMFSYNFHVR-------FLMFHLPIFLSNKCITSLLRSFSNFSLHTP 617


>AF003141-12|AAP68910.1|  946|Caenorhabditis elegans Hypothetical
           protein W02D3.10b protein.
          Length = 946

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 347 KTSMHIYNGWCKLATDGK*FINENAHTILIEGSMLP 240
           KT + +Y+G C+LAT     +N+    IL    M+P
Sbjct: 662 KTKIALYDGICELATQTSTMLNQFLDMILSHARMIP 697


>AF003141-11|AAP68909.1| 1437|Caenorhabditis elegans Hypothetical
           protein W02D3.10a protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 347 KTSMHIYNGWCKLATDGK*FINENAHTILIEGSMLP 240
           KT + +Y+G C+LAT     +N+    IL    M+P
Sbjct: 662 KTKIALYDGICELATQTSTMLNQFLDMILSHARMIP 697


>AC025716-10|AAK39607.1|  474|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.7 protein.
          Length = 474

 Score = 27.1 bits (57), Expect = 6.7
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 201 RSQCLRTFRLSPNSPAGTPQSPTPLPRL 118
           +  CL T R SPNSP  TP+    + RL
Sbjct: 121 KPSCLPTPRGSPNSPRLTPEDEMTVKRL 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,780,434
Number of Sequences: 27780
Number of extensions: 224889
Number of successful extensions: 629
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)