Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7d22
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   1.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   1.6  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   2.2  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   6.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.7  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 291 VYKRKCSYNFNRRKYVAVTMF 229
           V  RK   NFN  K++  TM+
Sbjct: 693 VKTRKIPENFNESKFIGFTMY 713


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 291 VYKRKCSYNFNRRKYVAVTMF 229
           V  RK   NFN  K++  TM+
Sbjct: 783 VKTRKIPENFNESKFIGFTMY 803


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 273 SYNFNRRKYVAVTMFLLFNLPIYLRSQCLRTFRLSPNS 160
           SYN   R++ ++       L I L +  L T  L P+S
Sbjct: 234 SYNILLRRHYSMNSTTYVTLTIVLMTMTLMTLWLEPSS 271


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = +3

Query: 273 SIFVYKLFSISCKLTPSIIDVHRCFATAGR 362
           S FV    SI C     +I  H C    G+
Sbjct: 19  SYFVTPTMSIKCNCKRHVIKPHICRKICGK 48


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 267 CMSIFVYKLFSISC 308
           C+SI   K++ ISC
Sbjct: 178 CISILAIKVYYISC 191


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,557
Number of Sequences: 438
Number of extensions: 3029
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)