Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7d14
(677 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 34 0.016
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 34 0.016
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 29 0.82
SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces pombe... 29 0.82
SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyce... 28 1.4
SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 28 1.4
SPCC320.10 |srp72||signal recognition particle subunit Srp72|Sch... 27 1.9
SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2... 27 2.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 4.4
SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces... 26 4.4
SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1 |S... 26 5.8
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 7.6
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 25 7.6
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 25 7.6
SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce... 25 7.6
SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.6
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 34.3 bits (75), Expect = 0.016
Identities = 18/45 (40%), Positives = 32/45 (71%)
Frame = +2
Query: 89 SAKNQSNLRESAKASSKKEVIVVHSEKIEYSNGLNSTLKAELEEE 223
S++++S+ ES+ + S++EVIV EK E S+ +S+ ++E EEE
Sbjct: 107 SSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEE 151
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 34.3 bits (75), Expect = 0.016
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Frame = +2
Query: 251 RGIRSVPPERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPKETQQSKR 430
RG S+P R S+P+ + P P + P ++ + + +T QS
Sbjct: 117 RGTPSLP-SRPGSRPSVLNQEQVPPPPVRPNVMSQMPPPP----SYSSSGSYSQTYQSNA 171
Query: 431 KRFFRRPVPNARLYRPGP-PPPKLISKQARVTWTAVSAGRALDTAS 565
P+P A P P PPP+ +S+ + +V A A TAS
Sbjct: 172 NYTASSPLPTASANAPLPVPPPRRVSQNSSYASGSVPAATAASTAS 217
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.7 bits (61), Expect = 0.82
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +2
Query: 248 PRGIRSVPPERVSSKPARVASTYT--PNPRLYPGPQAKFKKVKR 373
PR + VP + S+ + V S+ P P YPGP K V+R
Sbjct: 101 PRKLPGVPAPQKQSEASSVNSSTEKLPPPPSYPGPNTAHKNVER 144
>SPBC1289.04c |pob1||Boi family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 871
Score = 28.7 bits (61), Expect = 0.82
Identities = 35/117 (29%), Positives = 46/117 (39%), Gaps = 18/117 (15%)
Frame = +2
Query: 194 STLKAELEEEVD-----IIDLGAPRGIRSVPPERVSSKPARVASTYTPNPRLYPGPQAKF 358
S + E EE+D ID +P I S P S+ +S+ T +P P P AK
Sbjct: 527 SAISIEALEELDPPKITTIDGESPSSISSRLPS--SNLEQGSSSSVTKSPESMPDPSAKA 584
Query: 359 -------------KKVKRDRATETKPAEPKETQQSKRKRFFRRPVPNARLYRPGPPP 490
K + AT +PK+T+ SK F P P A L P PP
Sbjct: 585 SSPVTSKGVSINEKSAVNNYATPLSKPQPKDTKGSKLGNTFVAPSPAASL--PASPP 639
>SPBC16A3.07c |nrm1||negative regulator of MBF|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 342
Score = 27.9 bits (59), Expect = 1.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +2
Query: 209 ELEEEVDIIDLGAPRGIRSVPPERVSSKPARVASTYTPNPRLYPGP 346
+L V ++ PR IR + +S P + S PN Y GP
Sbjct: 260 KLTRSVSLLQHKTPRRIRPKSLSKSNSTPLKHLSAQKPNSNYYTGP 305
>SPBP8B7.10c |||U3 snoRNP-associated protein Utp16
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 346
Score = 27.9 bits (59), Expect = 1.4
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 14/108 (12%)
Frame = +2
Query: 95 KNQSNLRESAK--ASSKKEVIVVHSEKIEYSNGLNSTLKAELEEEVD--IIDLGAPRGIR 262
+N+ N +A+ ++SK ++ ++ + ++E +NST E+EE+VD +DL P+G +
Sbjct: 225 QNERNRERNAQRVSASKLDLAILEAAEVEE---INST--TEIEEKVDEASLDLYTPKGHK 279
Query: 263 SV-PPERVSSKPAR---------VASTYTPNPRLYPGPQAKFKKVKRD 376
V P + K R T +P L P + K + KRD
Sbjct: 280 IVFPNNEIPKKRTRSFRKGDFKVSVLKETNDPLLAPNYEKKLSQRKRD 327
>SPCC320.10 |srp72||signal recognition particle subunit
Srp72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 561
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 392 KPAEPKETQQSKRKRFFRRPVPNARLYRPGPPPPKLISKQARVTWTAVSAGRAL 553
+ E + SK+ R R+P P + + P P + I K+ R S G+++
Sbjct: 503 RSVEANSSNSSKKTRKRRKPTPKSFNPKATPDPQRWIPKRDRTNVKIKSKGKSM 556
>SPBC28E12.05 |esf2|SPBC3H7.17c|U3 snoRNP-associated protein Esf2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 334
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/72 (22%), Positives = 32/72 (44%)
Frame = +2
Query: 164 EKIEYSNGLNSTLKAELEEEVDIIDLGAPRGIRSVPPERVSSKPARVASTYTPNPRLYPG 343
E + +N + E+E++ I + +PP +K ++ S Y R+Y
Sbjct: 95 ETTKNANSIKKISLEEVEKQRKAIKRSGVIYLSRIPPYMAPNKLRQILSQYGKIGRVYLT 154
Query: 344 PQAKFKKVKRDR 379
P++ K+ +R R
Sbjct: 155 PESSAKRAQRLR 166
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 4.4
Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 248 PRGIRSVPPERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEP-KETQQS 424
P G S+P +++ A + L+ G K + + + A+ P+ P T QS
Sbjct: 76 PTGAPSLPTSSNNTQQAEERPSMPALGGLFAGGMPKLRHIGKSSASAAPPSAPAPPTPQS 135
Query: 425 KRKRFFRRPVPNARLYRPGPPPP 493
+ RP P + RP PPP
Sbjct: 136 E-----LRP-PTSAPPRPSIPPP 152
>SPBC3H7.03c |||2-oxoglutarate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1009
Score = 26.2 bits (55), Expect = 4.4
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 233 IDLGAPRGIRSVPPERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATE----TKPA 400
I L P G PE S++ R +PR +P + K ++ +D + TKP+
Sbjct: 767 IVLSLPHGYDGQGPEHSSARMERYLQLCNEDPREFPS-EEKLQRQHQDCNIQAIYVTKPS 825
Query: 401 EPKETQQSKRKRFFRRPV 454
+ + R FR+P+
Sbjct: 826 QYFHALRRNIHRQFRKPL 843
>SPBC4F6.06 |kin1||microtubule affinity-regulating kinase Kin1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 891
Score = 25.8 bits (54), Expect = 5.8
Identities = 20/100 (20%), Positives = 36/100 (36%)
Frame = +2
Query: 278 RVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPKETQQSKRKRFFRRPVP 457
R++ P + P Y +V + E P + T ++RK P+P
Sbjct: 524 RIAKTPVSSVPSSPVQPTSYNRTLPPMPEVVAYKGDEESPRVSRNTSLARRK-----PLP 578
Query: 458 NARLYRPGPPPPKLISKQARVTWTAVSAGRALDTASRAAL 577
+ + P P I K + S+ R + +S + L
Sbjct: 579 DTESHSPSPSATSSIKKNPSSIFRRFSSRRKQNKSSTSTL 618
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/81 (22%), Positives = 31/81 (38%)
Frame = +2
Query: 317 TPNPRLYPGPQAKFKKVKRDRATETKPAEPKETQQSKRKRFFRRPVPNARLYRPGPPPPK 496
+P+P+ Y GP D + + P+ S F P PN +Y P P
Sbjct: 271 SPSPQPYSGPILASTAPTLDGSYLSNPSNSNPAVMSLSSNFPSPPKPNNPVYLPPRGNPT 330
Query: 497 LISKQARVTWTAVSAGRALDT 559
+ + + V + S ++ T
Sbjct: 331 VNDRVSNVLPSITSFDSSVTT 351
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 25.4 bits (53), Expect = 7.6
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 288 ANPRGSLQPTLLIRDCILGPRRSLKK*RETAQRRPSQLNPRKPNNQSASGSSAGPCP 458
++P+ Q +R + P S+ + PS N P +AS SSA P P
Sbjct: 30 SDPKAKPQWECPVRGLTIPPPPSVDHSAPPSGPPPSYSNSAAPATPAASASSAAPAP 86
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 7.6
Identities = 22/98 (22%), Positives = 41/98 (41%)
Frame = +2
Query: 131 SSKKEVIVVHSEKIEYSNGLNSTLKAELEEEVDIIDLGAPRGIRSVPPERVSSKPARVAS 310
SSK SE I+ NST + EE++ I D + S P + +S+ A+
Sbjct: 351 SSKPNEAPTSSENIKADQPENSTKQENPEEDMQIKDAEEHSNLESTPAAQQTSEVE--AN 408
Query: 311 TYTPNPRLYPGPQAKFKKVKRDRATETKPAEPKETQQS 424
+ P P + + + + ET+ E ++ + +
Sbjct: 409 NHQEKPSSLPAVE-QINVNEENNTPETEGLEDEKEENN 445
>SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +2
Query: 458 NARLYRPGPPPPKLISKQARVTWTAVSAGRALDTASRAALGLVEER 595
N RL P PP + S+ R+T S R D AA GL + R
Sbjct: 16 NTRLSTPVHIPPPINSESTRITPQHGSPPRFGDHRISAAQGLFQRR 61
>SPAC4H3.02c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 391
Score = 25.4 bits (53), Expect = 7.6
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = +2
Query: 272 PERVSSKPARVASTYTPNPRLYPGPQAKFKKVKRDRATETKPAEPKE 412
P+ P + +T L P P+ K K+ E P EP E
Sbjct: 147 PDSQKLSPGKEKNTLDLKHCLLPSPEYKAPPAKKPEDYEASPGEPVE 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,500,886
Number of Sequences: 5004
Number of extensions: 47576
Number of successful extensions: 184
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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