Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7d11
(181 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-8|AAF60857.1| 377|Caenorhabditis elegans Hypothetical ... 27 1.3
Z73911-2|CAC42338.2| 402|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical pr... 27 2.3
AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical ... 27 2.3
AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical ... 27 2.3
AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical... 26 3.1
Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical pr... 25 5.4
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 25 5.4
AC024761-14|AAM97970.1| 98|Caenorhabditis elegans Peroxiredoxi... 25 5.4
AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxi... 25 5.4
AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxi... 25 5.4
U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid elon... 25 7.1
Z78539-1|CAB01727.1| 350|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 25 9.4
AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical ... 25 9.4
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 25 9.4
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 25 9.4
>AC024847-8|AAF60857.1| 377|Caenorhabditis elegans Hypothetical
protein Y65B4BR.1 protein.
Length = 377
Score = 27.5 bits (58), Expect = 1.3
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 171 NMLIYHNELCVHCIDHYNGQKQYPVW 94
N+ I N++C +C D NG +W
Sbjct: 169 NVFIGANDMCAYCNDRENGPHSKAIW 194
>Z73911-2|CAC42338.2| 402|Caenorhabditis elegans Hypothetical
protein T12A7.6 protein.
Length = 402
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = -1
Query: 139 TLYRSLQWTETISSMDVLSIISNKLRTLLKEYTLFPFSFNEHFART 2
T Y L W +D ++ S+ ++T K + L F F +A+T
Sbjct: 121 TFYSKLVWKRHSCEIDDVATCSHLIKTECKNWPLMQFQFACLYAKT 166
>Z47810-7|CAH10843.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +1
Query: 34 EIVYILLIVSLICYLLYLIHPYWILFLSIVMIYTMYTQ 147
++++ L++ ++C LL ++ P W ++ +I+ T +TQ
Sbjct: 175 KVLFWCLVLQVVCALLLIVAPTWWIY-AILKAGTGFTQ 211
>Z47810-6|CAB76718.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +1
Query: 34 EIVYILLIVSLICYLLYLIHPYWILFLSIVMIYTMYTQ 147
++++ L++ ++C LL ++ P W ++ +I+ T +TQ
Sbjct: 141 KVLFWCLVLQVVCALLLIVAPTWWIY-AILKAGTGFTQ 177
>AL031264-3|CAH04705.1| 538|Caenorhabditis elegans Hypothetical
protein F45E10.2b protein.
Length = 538
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +1
Query: 34 EIVYILLIVSLICYLLYLIHPYWILFLSIVMIYTMYTQ 147
++++ L++ ++C LL ++ P W ++ +I+ T +TQ
Sbjct: 175 KVLFWCLVLQVVCALLLIVAPTWWIY-AILKAGTGFTQ 211
>AL031264-2|CAB76735.1| 504|Caenorhabditis elegans Hypothetical
protein F45E10.2a protein.
Length = 504
Score = 26.6 bits (56), Expect = 2.3
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +1
Query: 34 EIVYILLIVSLICYLLYLIHPYWILFLSIVMIYTMYTQ 147
++++ L++ ++C LL ++ P W ++ +I+ T +TQ
Sbjct: 141 KVLFWCLVLQVVCALLLIVAPTWWIY-AILKAGTGFTQ 177
>AC090999-19|AAK26156.1| 575|Caenorhabditis elegans Hypothetical
protein Y82E9BR.16a protein.
Length = 575
Score = 26.2 bits (55), Expect = 3.1
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +1
Query: 34 EIVYILLIVSLICYLLYLIHPYWILF 111
++ ++ +++ + C L I PYW L+
Sbjct: 162 KVFFLAIVIQITCAYLIAIAPYWWLY 187
>Z30423-4|CAA83013.2| 1234|Caenorhabditis elegans Hypothetical
protein T20G5.5 protein.
Length = 1234
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +1
Query: 37 IVYILLIVSLICYLLYLIHPYWIL 108
+VY+ + SL +LL+ H W+L
Sbjct: 127 VVYVFMFRSLFLFLLHPSHQKWLL 150
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +1
Query: 43 YILLIVSLICYLLYLIHPYW 102
YI+ I S C + Y HP W
Sbjct: 144 YIVYIYSNYCQMCYRFHPQW 163
>AC024761-14|AAM97970.1| 98|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform b protein.
Length = 98
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 73 YLLYLIHPYWILFL-SIVMIYTMYTQFIVIN 162
YLL+L+ P++ILF+ I +++ +Y I ++
Sbjct: 23 YLLWLLLPFFILFIFPIFLVFFIYGCVIFVH 53
>AC024761-13|AAP13758.1| 353|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform c protein.
Length = 353
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 73 YLLYLIHPYWILFL-SIVMIYTMYTQFIVIN 162
YLL+L+ P++ILF+ I +++ +Y I ++
Sbjct: 44 YLLWLLLPFFILFIFPIFLVFFIYGCVIFVH 74
>AC024761-12|AAM97969.1| 387|Caenorhabditis elegans Peroxiredoxin
protein 6, isoform a protein.
Length = 387
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/31 (35%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 73 YLLYLIHPYWILFL-SIVMIYTMYTQFIVIN 162
YLL+L+ P++ILF+ I +++ +Y I ++
Sbjct: 44 YLLWLLLPFFILFIFPIFLVFFIYGCVIFVH 74
>U61954-9|AAK29808.1| 286|Caenorhabditis elegans Fatty acid
elongation protein 5 protein.
Length = 286
Score = 25.0 bits (52), Expect = 7.1
Identities = 7/32 (21%), Positives = 20/32 (62%)
Frame = +1
Query: 61 SLICYLLYLIHPYWILFLSIVMIYTMYTQFIV 156
+L+CY +H W+++++ ++ MY +++
Sbjct: 158 ALVCYHEDAVHMVWVVWMNYIIHAFMYGYYLL 189
>Z78539-1|CAB01727.1| 350|Caenorhabditis elegans Hypothetical
protein C31E10.1 protein.
Length = 350
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 88 IHPYWILFLSIVMIYTM 138
+HP+W FL + IYT+
Sbjct: 207 LHPHWKTFLVMTSIYTI 223
>Z70306-3|CAA94325.1| 318|Caenorhabditis elegans Hypothetical
protein C06G8.4 protein.
Length = 318
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 73 YLLYLIHPYWILFLSIVMIY 132
YL + H W+LFLS V Y
Sbjct: 96 YLHFHTHALWLLFLSFVYRY 115
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +1
Query: 7 VQNVH*N*MEIVYILLIVSLICYLLYLIHPYWILFLSIV 123
V+N+ V ++I+++I LY+ +W++F+ +V
Sbjct: 246 VRNLGQQHQHTVSCIMILNMIIEKLYICFYFWLIFVFVV 284
>AL031633-8|CAA21012.1| 296|Caenorhabditis elegans Hypothetical
protein Y39A1A.11 protein.
Length = 296
Score = 24.6 bits (51), Expect = 9.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -2
Query: 177 KKNMLIYHNELCVHCIDHYNG 115
K L H+ +C HCI ++ G
Sbjct: 14 KSGALCVHDGVCTHCIPYHPG 34
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +1
Query: 7 VQNVH*N*MEIVYILLIVSLICYLLYLIHPYWILFLSIV 123
V+N+ V ++I+++I LY+ +W++F+ +V
Sbjct: 246 VRNLGQQHQHTVSCIMILNMIIEKLYICFYFWLIFVFVV 284
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 24.6 bits (51), Expect = 9.4
Identities = 7/26 (26%), Positives = 17/26 (65%)
Frame = -1
Query: 169 HVNLSQ*IVCTLYRSLQWTETISSMD 92
H+N+++ CTL++ +++T +D
Sbjct: 477 HININRFDECTLFKEIEYTRITKEID 502
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,230,928
Number of Sequences: 27780
Number of extensions: 63127
Number of successful extensions: 192
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 12,740,198
effective HSP length: 40
effective length of database: 11,628,998
effective search space used: 220950962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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