Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7d03
         (709 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23081-1|AAA79846.1|  247|Caenorhabditis elegans triosephosphate...   266   8e-72
AL023828-10|CAA19447.1|  247|Caenorhabditis elegans Hypothetical...   266   8e-72
U61944-2|AAL56621.1|  705|Caenorhabditis elegans Dynamin related...    32   0.46 
U61944-1|AAL56622.1|  712|Caenorhabditis elegans Dynamin related...    32   0.46 
AF166274-1|AAD49861.1|  705|Caenorhabditis elegans dynamin-relat...    32   0.46 
U58760-4|AAK31462.2|  678|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AF077540-8|AAC26310.2|  683|Caenorhabditis elegans Btb and math ...    29   3.3  
U97011-5|AAO12451.1|  168|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U97011-4|AAQ65202.1|  273|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U97011-3|AAQ65201.1|  316|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical...    28   5.7  
Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U13645-6|AAV34802.1|  457|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U13645-5|AAM15541.1|  425|Caenorhabditis elegans Hypothetical pr...    28   7.5  
U13645-4|AAA20986.2|  529|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF016418-2|AAK18901.1|  893|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z81146-5|CAB03522.3|  699|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical ...    27   9.9  

>U23081-1|AAA79846.1|  247|Caenorhabditis elegans triosephosphate
           isomerase protein.
          Length = 247

 Score =  266 bits (653), Expect = 8e-72
 Identities = 128/206 (62%), Positives = 158/206 (76%)
 Frame = +1

Query: 91  MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 270
           M RKF VGGNWKMNGD   ++ IV  L     + +V+V+V  PA YL+Y K+ +   V V
Sbjct: 1   MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60

Query: 271 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGL 450
           AAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK  HALE+G+
Sbjct: 61  AAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGI 120

Query: 451 KVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQ 630
           KV+ CIGE LEERE+G T++V FRQL+A+V   G  WENIV+AYEPVWAIGTGKTA+ +Q
Sbjct: 121 KVVFCIGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQ 179

Query: 631 AQDVHHALRNWLSANVSGSVSDAVRI 708
           AQ+VH  +R +L   VS +V+DA RI
Sbjct: 180 AQEVHEWIRAFLKEKVSPAVADATRI 205


>AL023828-10|CAA19447.1|  247|Caenorhabditis elegans Hypothetical
           protein Y17G7B.7 protein.
          Length = 247

 Score =  266 bits (653), Expect = 8e-72
 Identities = 128/206 (62%), Positives = 158/206 (76%)
 Frame = +1

Query: 91  MGRKFVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEV 270
           M RKF VGGNWKMNGD   ++ IV  L     + +V+V+V  PA YL+Y K+ +   V V
Sbjct: 1   MTRKFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLV 60

Query: 271 AAQNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGL 450
           AAQNC+K PKGAFTGEISPAMIKD+G+ WVILGHSERR +FGE D L+AEK  HALE+G+
Sbjct: 61  AAQNCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGI 120

Query: 451 KVIACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQ 630
           KV+ CIGE LEERE+G T++V FRQL+A+V   G  WENIV+AYEPVWAIGTGKTA+ +Q
Sbjct: 121 KVVFCIGEKLEEREAGHTKDVNFRQLQAIVDK-GVSWENIVIAYEPVWAIGTGKTASGEQ 179

Query: 631 AQDVHHALRNWLSANVSGSVSDAVRI 708
           AQ+VH  +R +L   VS +V+DA RI
Sbjct: 180 AQEVHEWIRAFLKEKVSPAVADATRI 205


>U61944-2|AAL56621.1|  705|Caenorhabditis elegans Dynamin related
           protein protein1, isoform a protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 142 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 267
           ++INE+V+ + K  L P  E++  + AI L+Y+ T  P+  E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505


>U61944-1|AAL56622.1|  712|Caenorhabditis elegans Dynamin related
           protein protein1, isoform b protein.
          Length = 712

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 142 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 267
           ++INE+V+ + K  L P  E++  + AI L+Y+ T  P+  E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505


>AF166274-1|AAD49861.1|  705|Caenorhabditis elegans dynamin-related
           protein protein.
          Length = 705

 Score = 31.9 bits (69), Expect = 0.46
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +1

Query: 142 NQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVE 267
           ++INE+V+ + K  L P  E++  + AI L+Y+ T  P+  E
Sbjct: 464 DKINEVVSGVLKERLKPTNELVENLVAIELAYINTKHPEFTE 505


>U58760-4|AAK31462.2|  678|Caenorhabditis elegans Hypothetical
           protein C27A2.4 protein.
          Length = 678

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 366 KYNPIYSNVFDHSG*NFTSKSSFWRLPTVLGC 271
           K N ++S + +H+G    +  +FWR+P  L C
Sbjct: 171 KVNSLFSKLSEHTG-EVINADNFWRIPDTLRC 201


>AF077540-8|AAC26310.2|  683|Caenorhabditis elegans Btb and math
           domain containingprotein 47 protein.
          Length = 683

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = +1

Query: 133 GDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIP 255
           GD N    I+++++       +EV+ G PAI+ + V+ I+P
Sbjct: 47  GDSNYQEHIISDVEPQDFQKFLEVVHGEPAIFEATVQKILP 87


>U97011-5|AAO12451.1|  168|Caenorhabditis elegans Hypothetical
           protein F31F7.1b protein.
          Length = 168

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -2

Query: 507 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 343
           L+L R S  + L + GN +   + R +G+SN LF        K NC+ F   K +P+Y+ 
Sbjct: 73  LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132

Query: 342 VFDHSG*NFTSKSSFWRL 289
            F     NF   + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145


>U97011-4|AAQ65202.1|  273|Caenorhabditis elegans Hypothetical
           protein F31F7.1c protein.
          Length = 273

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -2

Query: 507 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 343
           L+L R S  + L + GN +   + R +G+SN LF        K NC+ F   K +P+Y+ 
Sbjct: 73  LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132

Query: 342 VFDHSG*NFTSKSSFWRL 289
            F     NF   + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145


>U97011-3|AAQ65201.1|  316|Caenorhabditis elegans Hypothetical
           protein F31F7.1a protein.
          Length = 316

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = -2

Query: 507 LSLARFSLFESLTNTGNDF---QARFKGMSN-LFSNKFIFFTK-NCSSFRMTKYNPIYSN 343
           L+L R S  + L + GN +   + R +G+SN LF        K NC+ F   K +P+Y+ 
Sbjct: 73  LALQRNSDGKKLYSIGNYYCVPEWRGRGVSNKLFVQVMKHVGKENCTLFGAVKMSPLYAT 132

Query: 342 VFDHSG*NFTSKSSFWRL 289
            F     NF   + FW +
Sbjct: 133 RF-----NFALMNEFWHM 145


>AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical
           protein K07H8.1 protein.
          Length = 493

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = +2

Query: 479 SKRENLARLRKLFLDN*KL*YRPLVTNGK-ILCLPMNLYGLLV 604
           +K+ N+ +L  + LDN  + + P   + + ILC  +NLYG L+
Sbjct: 112 AKQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLL 154


>Z81548-1|CAB04464.1| 1217|Caenorhabditis elegans Hypothetical
           protein F54F12.1 protein.
          Length = 1217

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 16/63 (25%), Positives = 31/63 (49%)
 Frame = +1

Query: 490 ESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLS 669
           +S ++ + +   LKAL   IG     + L+Y+ +  + +GK    +  Q V+H   NW+ 
Sbjct: 181 QSIQSSQSLLPVLKALRKVIGSHVNGLELSYKYIAGLPSGKLDLEELIQAVYH---NWIK 237

Query: 670 ANV 678
             +
Sbjct: 238 NRI 240


>U13645-6|AAV34802.1|  457|Caenorhabditis elegans Hypothetical
           protein C05D10.1c protein.
          Length = 457

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 699 SVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 592
           +V  TPT  G    T+SMVD+L L   ++   T SP
Sbjct: 195 TVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 230


>U13645-5|AAM15541.1|  425|Caenorhabditis elegans Hypothetical
           protein C05D10.1b protein.
          Length = 425

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 699 SVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 592
           +V  TPT  G    T+SMVD+L L   ++   T SP
Sbjct: 163 TVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 198


>U13645-4|AAA20986.2|  529|Caenorhabditis elegans Hypothetical
           protein C05D10.1a protein.
          Length = 529

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -2

Query: 699 SVRYTPTHIGRQPVTKSMVDILSLLGSSSLACTNSP 592
           +V  TPT  G    T+SMVD+L L   ++   T SP
Sbjct: 267 TVPATPTTPGANLFTQSMVDMLKLNAQNAAHSTGSP 302


>AF016418-2|AAK18901.1|  893|Caenorhabditis elegans Hypothetical
           protein C49G7.7 protein.
          Length = 893

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +1

Query: 121 WKMNGDKNQINEIVNNLKKGPLDPNVEVI 207
           W++NGD+  ++EI N+     LD +V VI
Sbjct: 83  WEINGDRETLSEIQNHNSYRDLDMDVLVI 111


>Z81146-5|CAB03522.3|  699|Caenorhabditis elegans Hypothetical
           protein K10D11.3 protein.
          Length = 699

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -3

Query: 566 FSHLSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKPD 441
           + ++  ++ TK   C   TS   P +L++   P+ AMT  PD
Sbjct: 451 YYNVQSLSATKGVTCWSDTSC--PVTLNAAKGPVSAMTLNPD 490


>AF003388-1|AAW88390.1| 2779|Caenorhabditis elegans Hypothetical
            protein R10F2.1 protein.
          Length = 2779

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/40 (37%), Positives = 26/40 (65%)
 Frame = +1

Query: 589  VWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDAVRI 708
            V+++ TG+  T   AQ  HH   + ++++VS S SDA+R+
Sbjct: 2612 VYSVKTGEIRTLSDAQHHHHHPTHSMTSSVSTS-SDALRM 2650


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,519,357
Number of Sequences: 27780
Number of extensions: 369413
Number of successful extensions: 1233
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)