Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7c18
         (336 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF024502-8|AAY43996.1|  297|Caenorhabditis elegans Hypothetical ...    29   0.63 
AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical...    28   1.9  
U41528-1|AAK39166.1|  155|Caenorhabditis elegans Hypothetical pr...    27   3.3  
AF047655-7|AAC04404.1|  561|Caenorhabditis elegans Hypothetical ...    27   3.3  
AF067219-13|AAC17024.1|  362|Caenorhabditis elegans Proteasome r...    27   4.4  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z73102-3|CAA97409.1|  337|Caenorhabditis elegans Hypothetical pr...    26   5.8  
Z19156-2|CAE17940.2|  275|Caenorhabditis elegans Hypothetical pr...    26   5.8  

>AF024502-8|AAY43996.1|  297|Caenorhabditis elegans Hypothetical
           protein M151.8 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 0.63
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +3

Query: 33  EFKIK**NALCATTSYCIVTGTFFNI 110
           EFK++  +   AT +YC  +GTFF+I
Sbjct: 269 EFKVEKHDGTKATVAYCATSGTFFSI 294


>AC024805-10|AAK39342.3| 1058|Caenorhabditis elegans Hypothetical
           protein Y51H7C.11 protein.
          Length = 1058

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 151 AFYETTSKLHCNLVSLTEQIIEFNI 225
           A Y+  ++LH N+  L E ++EF I
Sbjct: 370 AHYDHVARLHINISQLAEHLVEFGI 394


>U41528-1|AAK39166.1|  155|Caenorhabditis elegans Hypothetical
           protein C15C7.4 protein.
          Length = 155

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 178 HCNLVSLTEQIIEFNIGKQILHR 246
           HCN VS    I +F   KQIL R
Sbjct: 132 HCNAVSKVSNIFKFIFSKQILPR 154


>AF047655-7|AAC04404.1|  561|Caenorhabditis elegans Hypothetical
           protein C17B7.10 protein.
          Length = 561

 Score = 27.1 bits (57), Expect = 3.3
 Identities = 15/51 (29%), Positives = 24/51 (47%)
 Frame = +1

Query: 142 NIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRRSDFSALSSFEDLYST 294
           N+  FY     LH N+  L +  I F++  Q LH  S+   +    +L S+
Sbjct: 198 NVNIFYNA---LHANVEILNQMNIPFSVENQFLHNISETLKIRIIAELESS 245


>AF067219-13|AAC17024.1|  362|Caenorhabditis elegans Proteasome
           regulatory particle,non-atpase-like protein 8 protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 4.4
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 133 AAENIRAFYETTSKLHCNLVSLTEQIIEF 219
           A E I  +Y T  KLH N +++ EQ+  F
Sbjct: 120 AKEKIVGWYHTGPKLHKNDIAINEQLKRF 148


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 124 FPFAAENIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRR 249
           F +     R FY   S LHC  +  T Q +  NI   ++HR+
Sbjct: 734 FDWVVAKNRQFYGDAS-LHCKFIMWTLQQVIKNIPIDLMHRK 774


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 124 FPFAAENIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRR 249
           F +     R FY   S LHC  +  T Q +  NI   ++HR+
Sbjct: 734 FDWVVAKNRQFYGDAS-LHCKFIMWTLQQVIKNIPIDLMHRK 774


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 124 FPFAAENIRAFYETTSKLHCNLVSLTEQIIEFNIGKQILHRR 249
           F +     R FY   S LHC  +  T Q +  NI   ++HR+
Sbjct: 734 FDWVVAKNRQFYGDAS-LHCKFIMWTLQQVIKNIPIDLMHRK 774


>Z73102-3|CAA97409.1|  337|Caenorhabditis elegans Hypothetical
           protein B0035.2 protein.
          Length = 337

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 234 LFSYIKFYNLFCKRYKITVQFGCGLVKCSDVLSGERK 124
           LF  + F+   C+      +  CGL  C DVL   R+
Sbjct: 10  LFLLVSFFVQECESVGFAPELYCGLENCYDVLEVNRE 46


>Z19156-2|CAE17940.2|  275|Caenorhabditis elegans Hypothetical
           protein T02C1.2 protein.
          Length = 275

 Score = 26.2 bits (55), Expect = 5.8
 Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -2

Query: 329 LSWFQDLGGRLIV-EYKSSNELNALKSDLLCRICFPIL 219
           +SW +     L   ++K+SN+L+  + D+LC IC+ I+
Sbjct: 72  ISWRKHRAKPLFTPKWKNSNDLD--EDDVLCTICYDII 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,627,814
Number of Sequences: 27780
Number of extensions: 139400
Number of successful extensions: 372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)