Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7b24
(592 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0033 + 202703-202705,203397-203458,203566-203665,203875-20... 31 0.91
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 31 0.91
03_02_0348 + 7709894-7709926,7710516-7710604,7711202-7711277,771... 29 2.1
08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651 29 2.8
03_06_0114 + 31751471-31751785,31751919-31752056,31752183-317522... 29 3.7
05_04_0111 - 18079051-18079970,18080384-18080462 28 6.4
05_01_0008 + 60498-60552,60644-60864,60956-61013,61271-61443,615... 28 6.4
03_05_1139 - 30689514-30689609,30689795-30689956,30691245-306912... 28 6.4
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751... 27 8.5
08_02_0008 + 11212351-11214506,11214548-11214584 27 8.5
07_03_0908 + 22507565-22507810,22507925-22508872,22509314-225103... 27 8.5
>02_01_0033 +
202703-202705,203397-203458,203566-203665,203875-203916,
204264-204305,204437-204589,206559-207221
Length = 354
Score = 30.7 bits (66), Expect = 0.91
Identities = 21/86 (24%), Positives = 46/86 (53%)
Frame = +3
Query: 264 KLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFEMIL 443
KLL + C Q +++L +++L + +++ +M+ + R+KE +L M+L
Sbjct: 23 KLLGEGLGSCSVQE--LQELEVQLEKSLCSIRQKKQKMLMDQILELREKEMNLLKENMVL 80
Query: 444 QEKQYEHNLLRAEWDKSLGELRDMKA 521
++ + L + W S+GEL++ +A
Sbjct: 81 RD---QCKALSSPWSTSVGELKNKQA 103
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 30.7 bits (66), Expect = 0.91
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +3
Query: 321 LITTPDRALDAEMLT--RKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKS 494
L++ PD L E L +KQ +++ T R + R E L+EKQ E L +
Sbjct: 377 LVSVPDETLTPEQLKEKKKQILLKTTTEGRMRAKQRRAEEEALREKQEEERRLENP-ELY 435
Query: 495 LGELRDMKAAVSD 533
L ELR + +SD
Sbjct: 436 LEELRARYSELSD 448
>03_02_0348 +
7709894-7709926,7710516-7710604,7711202-7711277,
7712019-7712214,7712449-7712832,7712884-7714804,
7714906-7714966,7715952-7716371
Length = 1059
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 318 KLITTPDRALDAEMLTRKQNIMEALTNYRDKETSLRHFE 434
K++ + L AE+ +QN E +T YRD E + +E
Sbjct: 864 KVLQSKIEVLTAELDDERQNHQEDITRYRDLEEKIERYE 902
>08_01_0483 - 4243963-4244019,4244243-4245797,4246335-4246651
Length = 642
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Frame = +3
Query: 267 LLEKVTVKCVAQT--HAVKKLITTPD---RALDAEMLTRKQNIMEALTNYRDKETSLRHF 431
L + V +K VA+ + +K TT D A D ++ +++ + D+E+ ++++
Sbjct: 85 LTKPVELKIVAKEFENGLKYSGTTDDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYY 144
Query: 432 EMILQEKQYEH-NLLRAEWDK 491
E L+E E+ N ++ EW K
Sbjct: 145 ENKLKEINEEYNNSMKCEWPK 165
>03_06_0114 +
31751471-31751785,31751919-31752056,31752183-31752291,
31756033-31756598
Length = 375
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 351 AEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDM 515
AE +R + +++L + T E +KQ +H LLR ++ SLG+LR +
Sbjct: 173 AEFFSRVETQLDSLAESNCEGTGSSEEEQDPSDKQLKHQLLR-KYGGSLGDLRQV 226
>05_04_0111 - 18079051-18079970,18080384-18080462
Length = 332
Score = 27.9 bits (59), Expect = 6.4
Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 342 ALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEH-NLLRAEWDK 491
A D ++ ++++ + D+E+ ++++E L+E E+ N ++ EW K
Sbjct: 156 ASDRNIIDKRRHSISEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEWPK 206
>05_01_0008 +
60498-60552,60644-60864,60956-61013,61271-61443,
61528-61711,61823-61993,62483-62514,62596-62638,
62768-62835,63561-63605,63695-64162
Length = 505
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +3
Query: 201 QITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRKQNI 380
QI ++ E +A+ + K + +A KK++ T +ALD++ K ++
Sbjct: 194 QIKSKIDEETAEAVKASASAVSAIAKTNQELLASKDEEKKILVTLTQALDSQAKELK-SL 252
Query: 381 MEALTNYRD 407
E+L + RD
Sbjct: 253 CESLNHSRD 261
>03_05_1139 -
30689514-30689609,30689795-30689956,30691245-30691299,
30691695-30691959,30692749-30692959,30693542-30693721,
30693802-30693899,30694211-30694277,30694897-30694963,
30695335-30695447,30695988-30696032,30696116-30696223,
30696582-30696791,30697464-30697670,30697786-30697875,
30698168-30698389
Length = 731
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 522 LPSYPSIHRAIYPTQPATSCARTVSLVISSQNDED 418
+PS P H + P+ PAT+ L SS +D+D
Sbjct: 40 VPSPPPPHHLVVPSAPATTFMDQEELPESSSSDDD 74
>12_02_1035 - 25570009-25571241,25571940-25573709,25573797-25575118,
25575208-25575555,25576540-25576633
Length = 1588
Score = 27.5 bits (58), Expect = 8.5
Identities = 28/109 (25%), Positives = 51/109 (46%)
Frame = +3
Query: 192 LTPQITEQVKTEEIIKEYGDVAAIKLLEKVTVKCVAQTHAVKKLITTPDRALDAEMLTRK 371
LT I ++ + +YG + +KL V V+ + H +K L+ T DA+ + +
Sbjct: 729 LTEGIGSVMEELHLDDKYGSLDLMKL--DVIVQLIL--HEIKCLLNTIS---DAQDVKQN 781
Query: 372 QNIMEALTNYRDKETSLRHFEMILQEKQYEHNLLRAEWDKSLGELRDMK 518
Q + ++L T L HF + + + E ++LR EW EL ++
Sbjct: 782 QILEKSLV-----VTLLEHFGREVADLRSERSVLRQEWQAKSEELLQLQ 825
>08_02_0008 + 11212351-11214506,11214548-11214584
Length = 730
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/62 (25%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +3
Query: 318 KLITTPD---RALDAEMLTRKQNIMEALTNYRDKETSLRHFEMILQEKQYEH-NLLRAEW 485
K TT D A D ++ +++ + D+E+ ++++E L+E E+ N ++ EW
Sbjct: 280 KTRTTDDLETEASDRNIIDNRRHSVSEFMEKLDQESEIKYYENKLKEINEEYNNSMKCEW 339
Query: 486 DK 491
K
Sbjct: 340 PK 341
>07_03_0908 +
22507565-22507810,22507925-22508872,22509314-22510337,
22510425-22510477
Length = 756
Score = 27.5 bits (58), Expect = 8.5
Identities = 7/29 (24%), Positives = 17/29 (58%)
Frame = -3
Query: 440 YHLKMTKTGFLISIVCQGFHYILFPCKHL 354
+ +K +++ C+GF ++ PC+H+
Sbjct: 580 HFVKFDSLNSMVNCSCKGFEFVGIPCRHM 608
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,133,068
Number of Sequences: 37544
Number of extensions: 259222
Number of successful extensions: 791
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 791
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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