Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7b24
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.2  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.2  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   3.9  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 366 RKQNIMEALTNYRDKETSLRHFEMILQ 446
           R  N++E L NY DKE ++  F  +L+
Sbjct: 60  RTFNLVENLDNYNDKE-AVNEFMQLLK 85



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 369 KQNIMEALTNYRDKETSLRHFEMIL 443
           K N+ E   NY  ++  L HF  +L
Sbjct: 211 KHNVPEQRLNYFTEDVGLNHFYFML 235


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 366 RKQNIMEALTNYRDKETSLRHFEMILQ 446
           R  N++E L NY DKE ++  F  +L+
Sbjct: 60  RTFNLVENLDNYNDKE-AVNEFMQLLK 85



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 369 KQNIMEALTNYRDKETSLRHFEMIL 443
           K N+ E   NY  ++  L HF  +L
Sbjct: 211 KHNVPEQRLNYFTEDVGLNHFYFML 235


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 14/68 (20%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +3

Query: 213 QVKTEEIIKEYGDVAAIKLLEKVTVKCVAQT----HAVKKLITTPDRALDAEMLTRKQNI 380
           Q+ +E +IK++          +V ++ +A+     + V KLIT      DA++  +   +
Sbjct: 60  QLFSECLIKKFNGYDDGGNFNEVVIREIAEIFLDENGVNKLITECSAISDADLAVKSAKL 119

Query: 381 MEALTNYR 404
           ++ +  Y+
Sbjct: 120 LKCIGKYK 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,844
Number of Sequences: 438
Number of extensions: 3109
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)