Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7b22
(685 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 42 1e-04
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 40 3e-04
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 38 0.001
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 38 0.001
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 38 0.002
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 37 0.003
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 37 0.003
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 36 0.004
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 36 0.007
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 35 0.013
SPCC16C4.08c |skb15||Shk1 kinase binding protein 15|Schizosaccha... 34 0.017
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 34 0.022
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 33 0.029
SPCC63.06 |||human WDR89 family WD repeat protein|Schizosaccharo... 33 0.029
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 33 0.029
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 33 0.029
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 33 0.051
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 32 0.089
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 32 0.089
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S... 31 0.12
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 31 0.16
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 31 0.20
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 31 0.20
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 31 0.20
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 31 0.20
SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces p... 30 0.27
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 29 0.47
SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit Swd2|Schizosa... 29 0.47
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 29 0.63
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 29 0.63
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 29 0.63
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 28 1.1
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 28 1.4
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 28 1.4
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 1.4
SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20 |Schizosacc... 27 1.9
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 27 2.5
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 27 2.5
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 27 2.5
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 27 2.5
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 27 2.5
SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces ... 27 2.5
SPCC1235.09 |||histone deacetylase complex subunit|Schizosacchar... 27 3.3
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 26 4.4
SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|c... 26 4.4
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 26 4.4
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 26 5.8
SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces ... 26 5.8
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 26 5.8
SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase |Schi... 25 7.7
SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces p... 25 7.7
SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomy... 25 7.7
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 25 7.7
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 41.5 bits (93), Expect = 1e-04
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTT 615
H + + +ID G V+ D +IW++++ TC+R AHS+ I VS+ T
Sbjct: 137 HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLR-MLPAHSEPIISVSISADGTLC 195
Query: 616 FATASMDEYMSLWD 657
ATAS D +WD
Sbjct: 196 -ATASYDGMARIWD 208
Score = 30.3 bits (65), Expect = 0.27
Identities = 16/81 (19%), Positives = 35/81 (43%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTT 615
H + I+++ G T DG A+IWDV C++ + + + ++
Sbjct: 179 HSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQF-TENRKY 237
Query: 616 FATASMDEYMSLWDENIDKAV 678
++++ + LWD ++ V
Sbjct: 238 LLVSNLNSQIRLWDYRRNRVV 258
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 40.3 bits (90), Expect = 3e-04
Identities = 22/87 (25%), Positives = 39/87 (44%)
Frame = +1
Query: 424 SVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPK 603
S+ H DSIM + + + T D + WD K + + HS +++ ++V P
Sbjct: 613 SIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLILKLRGHHS-EVWALAVGP- 670
Query: 604 STTTFATASMDEYMSLWDENIDKAVLD 684
T + S D + LW++ D L+
Sbjct: 671 --TFVVSGSHDHSIRLWEQGDDLVFLE 695
Score = 32.7 bits (71), Expect = 0.051
Identities = 12/53 (22%), Positives = 27/53 (50%)
Frame = +1
Query: 409 RVKEMSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAH 567
R+ + + H + + L + + GA+G+ K+W+ K T+C+R + +
Sbjct: 386 RISAIEIPGHRADVRTL-ALSANHDVILSGANGSLKLWNKKTTSCIRTIECGY 437
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +1
Query: 439 DDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTF 618
D M +D ++VG D K+WD+ CV + H +I+ + V P +
Sbjct: 173 DSGDMDVDSKSSDSFLLSVGKDSFMKLWDLSIQHCVETH-VDHQGEIWAMCVSPDAKRCL 231
Query: 619 ATASMDEYMSLWD 657
TA + +W+
Sbjct: 232 -TAGTGSDVKVWE 243
Score = 30.7 bits (66), Expect = 0.20
Identities = 27/107 (25%), Positives = 47/107 (43%)
Frame = +1
Query: 334 VIICEDNGSMSIFSKKNQEDNAWSIRVKEMSVAEHDDSIMAIDCLEPGFEYVTVGADGNA 513
VI+ NGS+ +++KK IR E I C+ ++ G
Sbjct: 410 VILSGANGSLKLWNKKTTS----CIRTIECGYVLAASFINNDKCIVSAYK------SGEL 459
Query: 514 KIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLW 654
+++D+ ++ + +A H I+ ++V T FATAS D + LW
Sbjct: 460 EVYDIASSSLIERIQA-HDGAIWDLAVGHDGTY-FATASADHTVKLW 504
Score = 25.4 bits (53), Expect = 7.7
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +1
Query: 427 VAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKET 537
+ HD +I + G + T AD K+W +K +
Sbjct: 473 IQAHDGAIWDLAVGHDGTYFATASADHTVKLWSLKSS 509
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +1
Query: 487 VTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWDENI 666
+ G + ++W+VK C+ Y A H +I + + +T FA+ D+++ +WD N
Sbjct: 30 LAAGNERVVRLWNVKSGACIHEY-AGHGHEILDLDL-VYDSTKFASCGGDKFIQVWDVNT 87
Query: 667 DK 672
K
Sbjct: 88 GK 89
Score = 33.5 bits (73), Expect = 0.029
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +1
Query: 430 AEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKST 609
A H I+ +D + ++ + G D ++WDV T V H QI + + +
Sbjct: 53 AGHGHEILDLDLVYDSTKFASCGGDKFIQVWDV-NTGKVDRRLGGHLAQINTIRYN-EDS 110
Query: 610 TTFATASMDEYMSLWD 657
+ A+ S D + LWD
Sbjct: 111 SILASGSFDSKVRLWD 126
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 37.9 bits (84), Expect = 0.001
Identities = 18/86 (20%), Positives = 35/86 (40%)
Frame = +1
Query: 400 WSIRVKEMSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQI 579
W + H D++ + G +T DG K+WD+ C+ + H+ +
Sbjct: 326 WQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTF-TQHTSAV 384
Query: 580 YGVSVRPKSTTTFATASMDEYMSLWD 657
G+ + F ++S+D + WD
Sbjct: 385 SGLCFSKRGNVLF-SSSLDGSVRAWD 409
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 37.5 bits (83), Expect = 0.002
Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
Frame = +1
Query: 427 VAEHDDSIMAIDCLEPGFEYV--TVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRP 600
+ H +I A+ + P +Y+ T AD +WD++ + H ++YG+ P
Sbjct: 277 IQAHSKAINAV-AINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSP 335
Query: 601 KSTTTFATASMDEYMSLWD 657
A++S D + +WD
Sbjct: 336 HDEPILASSSTDRRVCIWD 354
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 36.7 bits (81), Expect = 0.003
Identities = 14/45 (31%), Positives = 28/45 (62%)
Frame = +1
Query: 520 WDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLW 654
WD+ CV+ ++ HS+ + +++ PK T TFA++ +D + +W
Sbjct: 127 WDMS-WKCVQTFEG-HSRYVMSLAINPKDTNTFASSCLDGTVKVW 169
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +1
Query: 400 WSI--RVKEMSVAEHDDSIMAIDCLEPGFE--YVTVGADGNAKIWDVKETTCVR 549
WS V ++ HD + ++ G + +T G D K+WD + CVR
Sbjct: 169 WSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVR 222
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 36.7 bits (81), Expect = 0.003
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 EHDDSIMAIDCLEPGF-EYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKST 609
EH I+ ++ G E ++ +DG K+WD++ ++ + +S + ++V
Sbjct: 1176 EHSSEIVNVEMQSSGMRELISASSDGEVKLWDIRMNHSLQTFSTDNS-GLTSLTVH-SHA 1233
Query: 610 TTFATASMDEYMSLWD 657
+AT S ++ + +WD
Sbjct: 1234 PVYATGSSNQSIKIWD 1249
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/88 (21%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 415 KEMSVAEHDDSIMAIDCLEPGFEYVTVG-ADGNAKIWDVKETTCVRNYKAAHSKQIYGVS 591
K+++ + H D+++A+ + G AD K+WD+ CV+++ HS ++ +
Sbjct: 246 KKINDSYHTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKSF-TYHSDKVSCLD 304
Query: 592 VRPKSTTTFATASMDEYMSLWDENIDKA 675
K+ + + S D+ + D +++A
Sbjct: 305 WYSKAPSVLLSGSYDKTAKIADLRLEEA 332
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 562 AHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
AH I +SV P + AT S D + LW+
Sbjct: 381 AHDGPISCLSVNPSVPSFVATGSTDRVVKLWN 412
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 35.5 bits (78), Expect = 0.007
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +1
Query: 400 WSI-RVKEMSVAE-HDDSIMAIDCLEPGFE-YVTVGADGNAKIWDVKETTCVRNYKAAHS 570
W I + K +SV + H+ I+++D L +VT G D AK+WD++ C + ++
Sbjct: 132 WDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATF-PGNT 190
Query: 571 KQIYGVSVRPKSTTTFATASMDEYMSLWD 657
I +S P S F T + D +D
Sbjct: 191 SDINSISFFP-SNADFVTGAEDGIARCFD 218
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 34.7 bits (76), Expect = 0.013
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVT-VGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTT 612
H + A+D L+ G E +T V D K+WD + C++ + + + V++ + T
Sbjct: 134 HAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKY--PLTAVAIAQQGTQ 191
Query: 613 TFATASMDEYMSLWD 657
F +D + +WD
Sbjct: 192 VF-IGGIDGAIKIWD 205
>SPCC16C4.08c |skb15||Shk1 kinase binding protein
15|Schizosaccharomyces pombe|chr 3|||Manual
Length = 341
Score = 34.3 bits (75), Expect = 0.017
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 304 DGCFMENSDKVIICEDNGSMSIFSKKNQEDNAWSIRVKEMSVAEHDDSIMAIDCLEPGFE 483
D CF +N ++ C DNG +S++SK +W + V + + H I I + P +
Sbjct: 84 DMCFTKNH--LLACHDNGQISMWSK-----GSWLL-VHTLKSSSHK-GITGI-AVHPSEK 133
Query: 484 Y-VTVGADGNAKIWDV 528
+TVG DG ++WD+
Sbjct: 134 LALTVGGDGKLRLWDL 149
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 33.9 bits (74), Expect = 0.022
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 412 VKEMSVAEHDDSIMAIDCLEPGFEYV-TVGADGNAKIWDVKETTCVRNYKAAHSKQIYGV 588
+++ S+ H + + + P E++ + DG ++W + + Y A H+ I+ V
Sbjct: 394 LQKSSLIGHTRPVFGVS-ISPQKEFILSCSEDGFTRLWSKDTKSTIVKY-AGHNAPIWDV 451
Query: 589 SVRPKSTTTFATASMDEYMSLWD 657
P FATAS D+ LWD
Sbjct: 452 QFSPFGYY-FATASHDQTARLWD 473
Score = 31.9 bits (69), Expect = 0.089
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 457 IDCLE--PGFEYVTVGA-DGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATA 627
+DC+ P Y+ G+ D ++WDV+ VR + A HS VS S + A
Sbjct: 490 VDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSP----VSALCMSADGLSLA 545
Query: 628 SMDE--YMSLWD 657
S DE + +WD
Sbjct: 546 SADESGIIKVWD 557
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 33.5 bits (73), Expect = 0.029
Identities = 17/89 (19%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Frame = +1
Query: 400 WSIRVKE--MSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSK 573
W++ ++ ++ H +I+ + + G + V+ ADG K+W + CV H
Sbjct: 534 WNVDTQQCVQTLEGHTGAILKLIYISQGTQVVSAAADGLVKVWSLSSGECVATLD-NHED 592
Query: 574 QIYGVSVRPKSTTTFATASMDEYMSLWDE 660
+++ ++ R + + D +S+W +
Sbjct: 593 RVWALASR-FDGSLLVSGGADAVVSVWKD 620
Score = 33.1 bits (72), Expect = 0.038
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 1/91 (1%)
Frame = +1
Query: 409 RVKEMSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGV 588
R+K M E M ID T GA+G K+WD+ +++ H I +
Sbjct: 95 RIKSMKAHETPVITMTID--PTNTLLATGGAEGLVKVWDIAGAYVTHSFR-GHGGVISAL 151
Query: 589 SV-RPKSTTTFATASMDEYMSLWDENIDKAV 678
+ ++T A+ + D + LWD N +++
Sbjct: 152 CFGKHQNTWVLASGADDSRVRLWDLNSSRSM 182
Score = 31.1 bits (67), Expect = 0.16
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +1
Query: 424 SVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPK 603
++ HD + AI + G + D K+WD T V H + ++ S P
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWD-SSTGEVVGVLRGHRRGVWACSFNPF 518
Query: 604 STTTFATASMDEYMSLWDENIDKAV 678
S A+ S D + +W+ + + V
Sbjct: 519 S-RQLASGSGDRTIRIWNVDTQQCV 542
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/67 (19%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIW--DVKETT--CVRNYKAAHSKQIYGVSVRPK 603
H D ++ +D E G T D ++W ++++ C+ + H+ + V++ P
Sbjct: 363 HTDIVLTLDSSEDGVWLATGAKDNTVRLWNLNIEDNVYKCIHVF-TGHTASVTAVALGPL 421
Query: 604 STTTFAT 624
+ T
Sbjct: 422 DVNGYPT 428
>SPCC63.06 |||human WDR89 family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 331
Score = 33.5 bits (73), Expect = 0.029
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 508 NAKIWDVK-ETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
+ ++WDV+ E +R + AH+ I + PK T S+D +SL D
Sbjct: 125 SVQLWDVRSEQKLIRQWNDAHNDDITHLQFHPKDNELLLTGSVDGLVSLLD 175
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 33.5 bits (73), Expect = 0.029
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYG 585
H SI +I ++VT A + KIWD + +R + ++ KQ+ G
Sbjct: 230 HKGSIFSISWSPDSSQFVTSSAGYSCKIWDANTGSLIREWLSSDKKQLVG 279
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 33.5 bits (73), Expect = 0.029
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +1
Query: 412 VKEMSVAEHDDSIMAIDCLEPGFEYV-TVGADGNAKIWDVKETTCVRNYKAAHSKQIYGV 588
V ++++ H ++ + + P Y+ + G D K WD++ +R+Y H +Y +
Sbjct: 196 VLKLTLTGHIATVRGL-AVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYH-GHLSGVYAL 253
Query: 589 SVRPKSTTTFATASMDEYMSLWD 657
+ P + TA D +WD
Sbjct: 254 KLHP-TLDVLVTAGRDAVARVWD 275
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 32.7 bits (71), Expect = 0.051
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 502 DGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLW 654
D +A++W V T + YK H+ ++ V+ P FATAS D+ LW
Sbjct: 400 DASARLWSVDTKTALVAYKG-HTGPVWDVAFGPFGHY-FATASHDQTAQLW 448
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 31.9 bits (69), Expect = 0.089
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 505 GNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
GN +WDV + ++ HS+ ++ + + + TAS D + LWD
Sbjct: 114 GNLNVWDVNLEALLYDFNE-HSRAVHKLDISSFHPSYVLTASQDGLIKLWD 163
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 31.9 bits (69), Expect = 0.089
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = +1
Query: 367 IFSKKNQEDNAWSIRVKEMS--VAEHDDSIMAIDCLEPGFEYVTVGADGNAKIW 522
+ S ++ W +R K+M + H+D + A+D G + GAD +IW
Sbjct: 447 VSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 30.7 bits (66), Expect = 0.20
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +1
Query: 463 CL-EPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDE 639
CL + G V+ D +WD +++T H K + S P ATAS D
Sbjct: 353 CLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRC-IATASFDS 411
Query: 640 YMSLWDENIDK 672
+ LWD K
Sbjct: 412 SVRLWDGKTGK 422
>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
Raf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 638
Score = 31.5 bits (68), Expect = 0.12
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +1
Query: 484 YVTVGADGNAKIWDVK-ETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYM-SLWD 657
+VT G+DG K+WD++ ++N+ +S YG S T D M SL +
Sbjct: 561 FVTGGSDGIVKVWDLRLNNPFIQNFTEMNSAITYGGFSEDASKLTVCCVGGDVNMYSLGN 620
Query: 658 ENIDK 672
+N +K
Sbjct: 621 DNGNK 625
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 31.1 bits (67), Expect = 0.16
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 424 SVAEHDDSIMAID-CLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQI 579
S++ H +++A+D C + F + ADG ++WD+++ + H+K +
Sbjct: 184 SLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYL 236
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 30.7 bits (66), Expect = 0.20
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 403 SIRVKEMSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIY 582
S R + ++A D+ + + + G + A G +I+D+ + +R A H ++
Sbjct: 69 SSRSVKKTIARFKDTAYSGNIRKDGKLLLAGDATGLVQIFDLSTRSILRALDA-HQFPVH 127
Query: 583 GVSVRPKSTTTFATASMDEYMSLWD 657
P + TTF + S D+ + +WD
Sbjct: 128 VTQFCPYANTTFLSGSDDKTVKVWD 152
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 30.7 bits (66), Expect = 0.20
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Frame = +1
Query: 436 HDDSIMAIDCLE----PGFEY--VTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVR 597
H DS+ ID L P E VT DG+ WDVK +++++ S QI + R
Sbjct: 216 HADSVTCIDALTGDLPPTGEIGMVTGSDDGSVHCWDVKTGVSLQSFQ-FRSSQILSLCFR 274
Query: 598 PK 603
PK
Sbjct: 275 PK 276
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 30.7 bits (66), Expect = 0.20
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 421 MSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRP 600
M+ H +++ AI G T DG K+WD++ + RNY H + + + P
Sbjct: 77 MTFEGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNYD--HKSPVNDLLIHP 134
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 562 AHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
AHS I+ V+ P + AT S D+ ++LWD
Sbjct: 279 AHSGPIHSVAFNPHNDFILATCSTDKTIALWD 310
>SPBC16A3.05c |rae1||RNA export factor Rae1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 352
Score = 30.3 bits (65), Expect = 0.27
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +1
Query: 433 EHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVS-VRPKST 609
EH +++++ G + + D +AK++D++ T AAH + V V T
Sbjct: 72 EHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQ--TGQNQQVAAHDDAVRCVRFVEAMGT 129
Query: 610 T-TFATASMDEYMSLWD 657
+ AT S D+ + WD
Sbjct: 130 SPILATGSWDKTLKYWD 146
Score = 27.1 bits (57), Expect = 2.5
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 10/80 (12%)
Frame = +1
Query: 454 AIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNY-------KAAHSKQIYGVS---VRPK 603
++ C G Y +G I ++ E +N+ +A +S +Y V+ P+
Sbjct: 206 SLACFIKGDGYAIGSVEGRCAIQNIDEKNASQNFSFRCHRNQAGNSADVYSVNSIAFHPQ 265
Query: 604 STTTFATASMDEYMSLWDEN 663
T F+TA D S WD++
Sbjct: 266 YGT-FSTAGSDGTFSFWDKD 284
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 29.5 bits (63), Expect = 0.47
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGV 588
H D++ I + G +T +D K+W ++ C+ ++ AHS ++ +
Sbjct: 215 HTDNVRDILISDDGRTILTASSDATIKLWSLRAQKCLFSF-IAHSDSVWAL 264
>SPBC18H10.06c |swd2|swd2.1|COMPASS complex subunit
Swd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 357
Score = 29.5 bits (63), Expect = 0.47
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 502 DGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
D + DV +R Y H + + + V P + TF +AS+D + LWD
Sbjct: 91 DNTVRYLDVVTNRYLR-YFPGHKQTVTSIDVSP-ADETFLSASLDNTIRLWD 140
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 29.1 bits (62), Expect = 0.63
Identities = 20/76 (26%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = +1
Query: 433 EHDDSIMAIDCLEPGFEYVTVGA-DGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKST 609
EH I+AID V G+ DG K+W V+ + +I V+ S
Sbjct: 101 EHKAEIVAIDTNTVDRRIVVTGSWDGTIKLWLGNLPNSVQTLNNGSNSRILTVATHYSSP 160
Query: 610 TTFATASMDEYMSLWD 657
S D WD
Sbjct: 161 NLLGYTSSDGLCKFWD 176
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 29.1 bits (62), Expect = 0.63
Identities = 15/66 (22%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 343 CEDNGSMSIFSKKNQEDNAWSIRVKEMS--VAEHDDSIMAIDCLEPGFE-YVTVGADGNA 513
C+ + S + S + W I ++ + HD + + L+ +V+VGADG+
Sbjct: 175 CKTDPSYIVVSSLDTTCTVWDIVAQQSKTQLIAHDKEVYDVAFLKDSINVFVSVGADGSV 234
Query: 514 KIWDVK 531
+++D++
Sbjct: 235 RMFDLR 240
Score = 28.7 bits (61), Expect = 0.83
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
Frame = +1
Query: 427 VAEHDDS-IMAIDCLEPGFEYVTVGA-DGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRP 600
V H+++ + + D + Y+ V + D +WD+ + AH K++Y V+
Sbjct: 161 VKTHNNAPLTSFDWCKTDPSYIVVSSLDTTCTVWDIVAQQS-KTQLIAHDKEVYDVAFLK 219
Query: 601 KSTTTFATASMDEYMSLWD 657
S F + D + ++D
Sbjct: 220 DSINVFVSVGADGSVRMFD 238
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 29.1 bits (62), Expect = 0.63
Identities = 22/75 (29%), Positives = 28/75 (37%), Gaps = 5/75 (6%)
Frame = +1
Query: 313 FMENSDKVIICEDNGSMSIFSKKNQEDNA---WSIRVKEM--SVAEHDDSIMAIDCLEPG 477
F E+ D V N S D+ W I E + H DSI+AID G
Sbjct: 57 FFEHKDSVFSVSINPVHSNLCASGGGDDLGYIWDITTGEQICQLTGHKDSIVAIDWSFDG 116
Query: 478 FEYVTVGADGNAKIW 522
T G D ++W
Sbjct: 117 TYIATGGMDSQVRLW 131
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 28.3 bits (60), Expect = 1.1
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 502 DGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWDENIDKAV 678
D A++W C+ ++ HS + ++ PK F + S+D + LW +KAV
Sbjct: 329 DKTARLWHPVRKDCLCCFE--HSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIK-EKAV 384
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 27.9 bits (59), Expect = 1.4
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Frame = +1
Query: 433 EHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVK--ETTCVRNYKAAHSKQIYGVS-VRPK 603
+HDD I G T +D K++ ++ + T + + HS ++ + PK
Sbjct: 7 QHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETLRG-HSGPVWQLGWAHPK 65
Query: 604 STTTFATASMDEYMSLWDE 660
T A+AS D ++ +W E
Sbjct: 66 FGTILASASYDGHVIVWRE 84
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 27.9 bits (59), Expect = 1.4
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Frame = +1
Query: 496 GADGNAKIWDVKET-TCVRNYK--------AAHSKQIYGVSVRPKSTTTFATASMDEYMS 648
G D IW V E T + Y+ HS+++ V P + A++S D +
Sbjct: 101 GDDSKIMIWKVPEDYTVMEPYEDVHPIAELKGHSRKVGLVQYHPTAANVLASSSADNTIK 160
Query: 649 LWD 657
LWD
Sbjct: 161 LWD 163
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 1.4
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 520 WDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
WD+++ T +N H K +S P+ T ++ D +W+
Sbjct: 244 WDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLSSGKDGRAMVWN 289
>SPCC4B3.14 |cwf20||complexed with Cdc5 protein Cwf20
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 290
Score = 27.5 bits (58), Expect = 1.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 512 AFPSAPTVTYSKPGSKQSIAIIESSCSATD 423
A PSAPT+ PG Q +++E + S D
Sbjct: 239 ALPSAPTIKSVAPGRHQLSSLVEMAISQKD 268
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/88 (18%), Positives = 39/88 (44%)
Frame = +1
Query: 415 KEMSVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSV 594
K +++ H + ++ + ++ D KIW ++ TC+ + +AH + +++
Sbjct: 384 KRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTF-SAHIGPVQSLAL 442
Query: 595 RPKSTTTFATASMDEYMSLWDENIDKAV 678
+ + + S+D + WD K V
Sbjct: 443 ---ADSRLFSCSLDGTIKQWDIEKKKCV 467
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 27.1 bits (57), Expect = 2.5
Identities = 20/59 (33%), Positives = 25/59 (42%)
Frame = -3
Query: 404 DHALSS*FFLEKILIEPLSSHIMTLSEFSIKQPSAVPLVSHKSLFVSFTFFASPTLLNR 228
DH +S + K L E L TLSE S Q L +S + F PT LN+
Sbjct: 1840 DHDISLMIDIVKPLHETLEKGPSTLSEISFAQTFGYDLRKARSYWQKFLQDGDPTELNQ 1898
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 27.1 bits (57), Expect = 2.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 287 SHKSLFVSFTFFASPTLLN 231
SH S F FT+ ASP LN
Sbjct: 406 SHSSAFQGFTYVASPNFLN 424
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKET--TCVRNYKAAHSKQ 576
H D + + LE +++ AD IWD + + T + ++ ++ SK+
Sbjct: 196 HKDIVERVRSLESSSVFISASADNTVGIWDFERSPETTLESFSSSISKK 244
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 27.1 bits (57), Expect = 2.5
Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Frame = +1
Query: 400 WSIRVKEM--SVAEHDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYK-AAHS 570
W++ E ++ H D + + LE ++ D + +WDV YK HS
Sbjct: 117 WNVSTGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLIVWDVSSQPSRLLYKLTGHS 176
Query: 571 KQIYGVSVRPKSTTTFATASMDEYMSLW 654
+ I ++ +P +T F T + + W
Sbjct: 177 RGIECITRQP-NTDIFWTCGSESSIRCW 203
>SPAC12G12.14c |pfs2||WD repeat protein Pfs2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 509
Score = 27.1 bits (57), Expect = 2.5
Identities = 16/59 (27%), Positives = 25/59 (42%)
Frame = +1
Query: 481 EYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLWD 657
++VT DG+ K+W+ +T H + V P S A+ S D + WD
Sbjct: 178 KFVTASDDGSLKVWNFHMST-EELKLTGHGWDVKTVDWHP-SKGLLASGSKDNLVKFWD 234
>SPCC1235.09 |||histone deacetylase complex
subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 564
Score = 26.6 bits (56), Expect = 3.3
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +1
Query: 481 EYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTTFATASMDEYMSLW 654
E+VT +G+ +++ V V AH I + + + TAS D + LW
Sbjct: 359 EFVTSDVEGSLRVYKVDGKAPVSTVSHAHDNSIVALRYNLR-ISLLLTASSDTTVKLW 415
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 26.2 bits (55), Expect = 4.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVK 531
H DS++ G T G D AK+WD++
Sbjct: 299 HSDSVLTGSWHPNGNILATGGQDTTAKVWDIR 330
>SPAC513.05 |ams1||alpha-mannosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1077
Score = 26.2 bits (55), Expect = 4.4
Identities = 17/64 (26%), Positives = 33/64 (51%)
Frame = -3
Query: 584 PYICLLCAAL*FLTQVVSFTSHIFAFPSAPTVTYSKPGSKQSIAIIESSCSATDISFTRI 405
P IC LC FLTQ +S+ ++I +FP++ + GS+ + ++ D + +
Sbjct: 411 PQICRLCGMDRFLTQKLSW-NNINSFPTSTFNWVALDGSQVICHMPPANTYTADTNVNDV 469
Query: 404 DHAL 393
H++
Sbjct: 470 LHSI 473
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/73 (20%), Positives = 28/73 (38%)
Frame = +1
Query: 436 HDDSIMAIDCLEPGFEYVTVGADGNAKIWDVKETTCVRNYKAAHSKQIYGVSVRPKSTTT 615
H D++M + E + AD + K+W + + + + H I+GV +
Sbjct: 249 HRDAVMGLAMRRGTNEMFSCSADRSIKVWSLDQMSYIETL-FGHQDVIFGVDALARERCV 307
Query: 616 FATASMDEYMSLW 654
+ D LW
Sbjct: 308 -SVGGRDRTSRLW 319
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 25.8 bits (54), Expect = 5.8
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = -3
Query: 377 LEKILIEPLSSHIMTLSEFSIKQPSAVPLVSHKSLFVSFTFFASPTLLNRLAAPVQ*RPV 198
+ ++L EP SS LS S+K P + V ++ + F SP++ N+L +P+ RP
Sbjct: 925 VNRVLNEPSSS---PLSSSSLKSPLSKEGVLNQQGHEQYNFSLSPSIRNKL-SPIC-RPS 979
Query: 197 NSEHP 183
P
Sbjct: 980 QGSSP 984
>SPCC757.05c |||acetylornithine deacetylase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 400
Score = 25.8 bits (54), Expect = 5.8
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -3
Query: 380 FLEKILIEPLSSHIMTLSEFSIKQPSAVPLVSHKSL 273
++ +L PL+ ++ + SI + +V L+SH+SL
Sbjct: 19 WMSPVLAGPLNFGYLSWGQHSILEQDSVQLISHQSL 54
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 25.8 bits (54), Expect = 5.8
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 5/121 (4%)
Frame = +1
Query: 310 CFMENSDKVIICEDNGSMSIFSKKNQEDNAWSIRVKEMSVAEHDDSIMAIDCLEPGFEYV 489
C N + V+ N S ++S ++ N I + +E AI L+ G
Sbjct: 104 CLCVNENLVVCGCSNSSCIVYSWNAEQRNLTEI--SRFTCSEIIPLEFAIVKLDHGIILT 161
Query: 490 TVGADGNAKIWDVKETTCVRNYKAA---HSKQIYGVSVRPKS--TTTFATASMDEYMSLW 654
G+ ++ KA H + +S + S T T A+ S D Y+ LW
Sbjct: 162 VCGSSKKIMVYGSDSAISSFKLKAVLRGHLDWVRTLSFKKTSGSTATLASGSQDRYIRLW 221
Query: 655 D 657
+
Sbjct: 222 N 222
>SPCC364.07 ||SPCC4G3.01|D-3 phosphoglycerate dehydrogenase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 466
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -3
Query: 320 SIKQPSAVPLVSHKSLFVSFTFFASPTLLNRLAA 219
S KQ S++P + H++ FVS ASP N +++
Sbjct: 234 SAKQLSSLPELLHRADFVSLHVPASPETKNMISS 267
>SPCC18B5.10c |||TREX complex subunit Tex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 309
Score = 25.4 bits (53), Expect = 7.7
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +1
Query: 400 WSIRVKEMSVAEHDDSIMAIDCLEPGFEYVTVG-ADGNAKIWDVKETTCVRN 552
W + + H+ + I+ P ++ +G AD +WD +E C R+
Sbjct: 181 WPSLKRVYDIKAHNSNCFCIE-FSPDNRHLAIGGADAITSLWDPQELICERS 231
>SPAC1093.05 |||ATP-dependent RNA helicase Hca4 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 735
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 235 KSVGEAKNVNETNKDLWLTSGTADGCFMENSDKVIICEDNGSMSIFSKKNQED 393
+ GE N N K+ +S A + +++DKV +D G+ F N ED
Sbjct: 564 EETGERFNANSKRKEKMASSKKAMLKYKKSADKVYF-DDEGNAIPFYAMNTED 615
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 25.4 bits (53), Expect = 7.7
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 487 VTVGADGNAKIWDVKETTCVRNYKAAHS 570
VT GAD K+WD +R YK HS
Sbjct: 281 VTAGADSLLKVWD------LRTYKELHS 302
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,878,628
Number of Sequences: 5004
Number of extensions: 61186
Number of successful extensions: 249
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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