Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7b22
         (685 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.38 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.7  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   3.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.3  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   8.3  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.8 bits (54), Expect = 0.38
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 557 RQHTVNKYMEYQFGQNQQQHLPQHL 631
           + HT + +M+ Q GQ+Q Q   QHL
Sbjct: 171 QMHTQHPHMQPQQGQHQSQAQQQHL 195


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 10/37 (27%), Positives = 20/37 (54%)
 Frame = +1

Query: 277 DLWLTSGTADGCFMENSDKVIICEDNGSMSIFSKKNQ 387
           D+ + + T  G  +  S +++ CE NGS  ++   N+
Sbjct: 171 DIAVNTTTEKGALVTLSVQLLSCEVNGSTLVYIGDNE 207


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 487 VTVGADGNAKI 519
           VTVG+DGNA I
Sbjct: 463 VTVGSDGNANI 473


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 558 LVISNTSRLFHIPYL 514
           L ++N  RLFHIP +
Sbjct: 83  LQVANLLRLFHIPQI 97


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 558 LVISNTSRLFHIPYL 514
           L ++N  RLFHIP +
Sbjct: 173 LQVANLLRLFHIPQI 187


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +1

Query: 4   VLINSMFSVDIIFL*IKMDQCNKIVPPHLNAEVYRTDTTGTSSF 135
           VL+  +  + ++ L    D+CNK  P   +   YR     T  F
Sbjct: 543 VLLVIIIIMTVLILRRASDECNKKQPSDCDTLEYRNGEVTTPLF 586


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,904
Number of Sequences: 438
Number of extensions: 4100
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20830365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)