Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7b20
         (569 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical...    76   2e-14
Z77663-3|CAB01212.1|  229|Caenorhabditis elegans Hypothetical pr...    49   2e-06
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr...    46   1e-05
Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    38   0.004
Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical pr...    38   0.004
U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical pr...    29   1.8  
U40947-5|AAC48070.1|  505|Caenorhabditis elegans Inward rectifyi...    29   2.4  
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical pr...    29   3.1  
U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AF024498-8|AAF39807.3|  305|Caenorhabditis elegans Serpentine re...    29   3.1  
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr...    28   5.4  
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    27   7.2  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    27   7.2  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    27   7.2  
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p...    27   7.2  
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr...    27   7.2  
Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AF047659-15|AAC04426.1|  493|Caenorhabditis elegans Hypothetical
           protein K07H8.1 protein.
          Length = 493

 Score = 76.2 bits (179), Expect = 2e-14
 Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
 Frame = +3

Query: 192 IGSRVKCNDDFGTVXYIGEVQGYKGL-WYGIQWDNESRGKHDGCLDGIQYFKTSKPSAGS 368
           IG RV+ N +  TV YIGEV GY    W G++WD+ +RGKHDG + G +YF+T  P+ GS
Sbjct: 3   IGQRVRINFEVATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHPNGGS 62

Query: 369 FVRPNKIIPSKT 404
            ++ ++I+P  T
Sbjct: 63  LMK-HEIVPKPT 73


>Z77663-3|CAB01212.1|  229|Caenorhabditis elegans Hypothetical
           protein F53F4.3 protein.
          Length = 229

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 26/70 (37%), Positives = 41/70 (58%)
 Frame = +3

Query: 171 GNDNNVYIGSRVKCNDDFGTVXYIGEVQGYKGLWYGIQWDNESRGKHDGCLDGIQYFKTS 350
           GN   V +G+++      G V Y+G  +  +G+W G+++D E  GK+DG + G++YF   
Sbjct: 149 GNRCEVTVGAQMARR---GEVAYVGATKFKEGVWVGVKYD-EPVGKNDGSVAGVRYFDCD 204

Query: 351 KPSAGSFVRP 380
            P  G FVRP
Sbjct: 205 -PKYGGFVRP 213


>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
           protein ZK593.5 protein.
          Length = 1326

 Score = 46.4 bits (105), Expect = 1e-05
 Identities = 23/66 (34%), Positives = 40/66 (60%)
 Frame = +3

Query: 192 IGSRVKCNDDFGTVXYIGEVQGYKGLWYGIQWDNESRGKHDGCLDGIQYFKTSKPSAGSF 371
           IG+RVK +   G V + G+ Q  +G W G+  D  + GK++G +  +QYF+  +P+ G F
Sbjct: 5   IGTRVKTSSGNGRVVFCGQTQFAEGDWVGVILDT-ATGKNNGTVQNVQYFE-CEPNFGVF 62

Query: 372 VRPNKI 389
           V+ + +
Sbjct: 63  VKSSAV 68


>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +3

Query: 225 GTVXYIGEVQGYKGLWYGIQWDNESRGKHDGCLDGIQYFKTSKPSAGSF 371
           G + Y+G + G  G++ GI+   E  GKHDG   G+ YF  + P  G F
Sbjct: 33  GFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQGVSYF-IATPYHGIF 79


>Z27081-2|CAA81607.2|  937|Caenorhabditis elegans Hypothetical
           protein M01A8.2a protein.
          Length = 937

 Score = 38.3 bits (85), Expect = 0.004
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +3

Query: 225 GTVXYIGEVQGYKGLWYGIQWDNESRGKHDGCLDGIQYFKTSKPSAGSF 371
           G + Y+G + G  G++ GI+   E  GKHDG   G+ YF  + P  G F
Sbjct: 33  GFLRYVGPIHGKDGMFCGIEL-LEPNGKHDGTFQGVSYF-IATPYHGIF 79


>U41510-1|ABP49525.1|  327|Caenorhabditis elegans Hypothetical
           protein ZC449.6 protein.
          Length = 327

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +3

Query: 330 IQYFKTSKPSAGSFVRPNKIIPSKTCAEAIRQYYGDPEDETLA 458
           +  + +SK  A +FVR    I  KT     R  YG P+D T+A
Sbjct: 121 LDIYSSSKAEAEAFVRSQSTIQFKTTCLRFRAIYG-PQDVTVA 162


>U40947-5|AAC48070.1|  505|Caenorhabditis elegans Inward rectifying
           k (potassium)channel family protein 1 protein.
          Length = 505

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = +2

Query: 365 FFCSSKQDHPIEDLRGSHKTILWRSGGRNISCSPQNHHQ*MEEGNGSAFHRN 520
           ++C    +H +ED R S  T L      +   +P NH Q     N   F  N
Sbjct: 404 YYCHDSHEHKLEDNRSSDSTPLPSPSPYSYPSTPLNHFQ--SSSNSPVFSNN 453


>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
           protein F40F12.5 protein.
          Length = 1144

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
 Frame = +3

Query: 165 VDGNDNNVYIGSRVKCN----DDFGTVXYIGEVQGYKGLWYGIQWDNESRGKHDGCLDGI 332
           V+ +  N  IG +   N    ++ G + YIG ++G+K L+ G+++ N + G   G  +  
Sbjct: 451 VESDQLNFRIGDQCIWNNNGAEERGIIKYIGFLKGHKTLYAGVEFKN-TIGAGTGVFNRE 509

Query: 333 QYFKTSKPSAG 365
           Q F      AG
Sbjct: 510 QLFLAKDGHAG 520


>U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical
           protein F35C8.7a protein.
          Length = 771

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 97  WWAQCLLIYYQNFATVPWTVVMASMEMII--TSILVVV 204
           WW   +LI+     +  WTV+M  +  +I   SIL+V+
Sbjct: 312 WWQTLILIFAAGILSFIWTVIMRLLGSLIIWLSILIVL 349


>U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical
           protein F35C8.7b protein.
          Length = 730

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 97  WWAQCLLIYYQNFATVPWTVVMASMEMII--TSILVVV 204
           WW   +LI+     +  WTV+M  +  +I   SIL+V+
Sbjct: 271 WWQTLILIFAAGILSFIWTVIMRLLGSLIIWLSILIVL 308


>AF024498-8|AAF39807.3|  305|Caenorhabditis elegans Serpentine
           receptor, class x protein105 protein.
          Length = 305

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/42 (28%), Positives = 25/42 (59%)
 Frame = +1

Query: 130 NFATVPWTVVMASMEMIITSILVVV*NVMTISGLLXILVRFR 255
           NF  VPWT    ++EMI   +++++ ++   + +L IL+  +
Sbjct: 153 NFGHVPWTRPPCALEMIYV-LIIIIFSLGVFTNILNILIAIK 193


>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
            C23F12.1a protein.
          Length = 2329

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 78   FEPAKIMVGAMPVNLLPKFCNGAMDSCNGVDGN 176
            ++PAKI VGA+P  LL K     +D+     GN
Sbjct: 1237 YDPAKIKVGAIPKGLLDKPVYFTVDASEAGVGN 1269


>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
            C23F12.1b protein.
          Length = 2747

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 78   FEPAKIMVGAMPVNLLPKFCNGAMDSCNGVDGN 176
            ++PAKI VGA+P  LL K     +D+     GN
Sbjct: 1237 YDPAKIKVGAIPKGLLDKPVYFTVDASEAGVGN 1269


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 69  ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 164
           + + +P  + V     +  P FC+G  D+C G
Sbjct: 68  VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 69  ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 164
           + + +P  + V     +  P FC+G  D+C G
Sbjct: 68  VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 69  ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 164
           + + +P  + V     +  P FC+G  D+C G
Sbjct: 68  VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +3

Query: 69  ILIFEPAKIMVGAMPVNLLPKFCNGAMDSCNG 164
           + + +P  + V     +  P FC+G  D+C G
Sbjct: 68  VTVIDPTVVSVRKRDCSKSPLFCSGGQDTCEG 99


>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
            protein 44, isoform f protein.
          Length = 6994

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 324  DGIQYFKTSKPSAGSFVRPNK--IIPSKTCAEAIRQYYGDPED 446
            D +  +  S  S    VRP++  II + T     R+Y+ +PE+
Sbjct: 3528 DNVSEYSESSTSVSREVRPDEPHIIETTTTTTVTREYHNEPEE 3570


>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
            protein.
          Length = 6994

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +3

Query: 324  DGIQYFKTSKPSAGSFVRPNK--IIPSKTCAEAIRQYYGDPED 446
            D +  +  S  S    VRP++  II + T     R+Y+ +PE+
Sbjct: 3528 DNVSEYSESSTSVSREVRPDEPHIIETTTTTTVTREYHNEPEE 3570


>Z11505-1|CAA77582.1|  460|Caenorhabditis elegans Hypothetical
           protein F59B2.2 protein.
          Length = 460

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 19/63 (30%), Positives = 28/63 (44%)
 Frame = -1

Query: 545 LVYFFKTNHFDERRSHFPLPFIDDGSAVSS*CFVLRISIILSYGFRASLRWDDLVWTNKR 366
           L +   TN F E R       +   + VSS  FV+  ++I+ Y  +   +WD L      
Sbjct: 180 LFFILLTNMFTEMR------IVSFFALVSSVFFVIGAAVIMQYTVQQPNQWDKLPAATNF 233

Query: 365 TGT 357
           TGT
Sbjct: 234 TGT 236


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,223,539
Number of Sequences: 27780
Number of extensions: 313798
Number of successful extensions: 765
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 760
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)