BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7b12
(690 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 29 0.042
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 29 0.042
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 29 0.042
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 29 0.042
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 26 0.29
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 26 0.29
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 26 0.29
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 26 0.29
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 22 4.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 4.8
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 4.8
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 22 4.8
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 4.8
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 4.8
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.4
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.4
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.042
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
L NN + + +N NN K L+ Y ++Y+ +P + V ++C
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.042
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
L NN + + +N NN K L+ Y ++Y+ +P + V ++C
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.042
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
L NN + + +N NN K L+ Y ++Y+ +P + V ++C
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 29.1 bits (62), Expect = 0.042
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +3
Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
L NN + + +N NN K L+ Y ++Y+ +P + V ++C
Sbjct: 85 LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.2 bits (55), Expect = 0.29
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +3
Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
+ NN K L+ Y ++Y+ +P + + ++C
Sbjct: 312 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 342
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.2 bits (55), Expect = 0.29
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +3
Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
+ NN K L+ Y ++Y+ +P + + ++C
Sbjct: 323 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 353
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 26.2 bits (55), Expect = 0.29
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +3
Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
+ NN K L+ Y ++Y+ +P + + ++C
Sbjct: 323 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 353
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 26.2 bits (55), Expect = 0.29
Identities = 8/31 (25%), Positives = 18/31 (58%)
Frame = +3
Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
+ NN K L+ Y ++Y+ +P + + ++C
Sbjct: 312 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 342
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 22.2 bits (45), Expect = 4.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 210 WPVPRKLKVIVFCL 251
WP R+LK ++CL
Sbjct: 63 WPETRQLKCYMYCL 76
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
I+S + K + ++NNN+ + Y+N
Sbjct: 81 IISSL-SNKTIHNNNNNYKKLQYYN 104
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
I+S + K + ++NNN+ + Y+N
Sbjct: 81 IISSL-SNKTIHNNNNNYKKLQYYN 104
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
I+S + K + ++NNN+ + Y+N
Sbjct: 81 IISSL-SNKTIHNNNNNYKKLQYYN 104
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
I+S + K + ++NNN+ + Y+N
Sbjct: 81 IISSL-SNKTIHNNNNNYKKLQYYN 104
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 4.8
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -2
Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
I+S + K + ++NNN+ + Y+N
Sbjct: 314 IISSL-SNKTIHNNNNNYKKLQYYN 337
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/45 (20%), Positives = 22/45 (48%)
Frame = +1
Query: 502 DLKVSQMVRKLTVEQMTRNDFYSMNCTCTDGLLKDDATHQKIKQK 636
++ + ++ L++++ R+D C T+ DD + I Q+
Sbjct: 830 EILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQE 874
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.4
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 440 YHLLYYNSKNTMCNNY 487
+H+L + +KN NNY
Sbjct: 486 FHILQFITKNGTSNNY 501
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,872
Number of Sequences: 438
Number of extensions: 3626
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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