SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7b12
         (690 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    29   0.042
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    29   0.042
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    29   0.042
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    29   0.042
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    26   0.29 
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    26   0.29 
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    26   0.29 
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    26   0.29 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   4.8  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   4.8  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   4.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.8  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   4.8  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   8.4  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           L NN + +  +N        NN K L+ Y ++Y+  +P  + V ++C
Sbjct: 85  LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           L NN + +  +N        NN K L+ Y ++Y+  +P  + V ++C
Sbjct: 85  LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           L NN + +  +N        NN K L+ Y ++Y+  +P  + V ++C
Sbjct: 85  LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 29.1 bits (62), Expect = 0.042
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = +3

Query: 108 LINNVRINT*SNVKT*LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           L NN + +  +N        NN K L+ Y ++Y+  +P  + V ++C
Sbjct: 85  LSNNYKYSNYNNYNNNNYNNNNYKKLQYYNINYIEQIPIPVPVPIYC 131


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           +   NN K L+ Y ++Y+  +P  + + ++C
Sbjct: 312 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 342


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           +   NN K L+ Y ++Y+  +P  + + ++C
Sbjct: 323 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 353


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           +   NN K L+ Y ++Y+  +P  + + ++C
Sbjct: 323 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 353


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = +3

Query: 156 LERRNNIKVLRRYKMSYVWPVPRKLKVIVFC 248
           +   NN K L+ Y ++Y+  +P  + + ++C
Sbjct: 312 IHNNNNYKKLQYYNINYIEQIPVPVPIPIYC 342


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 210 WPVPRKLKVIVFCL 251
           WP  R+LK  ++CL
Sbjct: 63  WPETRQLKCYMYCL 76


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
           I+S +   K + ++NNN+  + Y+N
Sbjct: 81  IISSL-SNKTIHNNNNNYKKLQYYN 104


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
           I+S +   K + ++NNN+  + Y+N
Sbjct: 81  IISSL-SNKTIHNNNNNYKKLQYYN 104


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
           I+S +   K + ++NNN+  + Y+N
Sbjct: 81  IISSL-SNKTIHNNNNNYKKLQYYN 104


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
           I+S +   K + ++NNN+  + Y+N
Sbjct: 81  IISSL-SNKTIHNNNNNYKKLQYYN 104


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -2

Query: 452 IVSGIHERKWLKSDNNNFLSINYFN 378
           I+S +   K + ++NNN+  + Y+N
Sbjct: 314 IISSL-SNKTIHNNNNNYKKLQYYN 337


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/45 (20%), Positives = 22/45 (48%)
 Frame = +1

Query: 502 DLKVSQMVRKLTVEQMTRNDFYSMNCTCTDGLLKDDATHQKIKQK 636
           ++  + ++  L++++  R+D     C  T+    DD +   I Q+
Sbjct: 830 EILANGVLSDLSIKRTERSDSALFTCVATNAFGSDDTSINMIVQE 874


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 440 YHLLYYNSKNTMCNNY 487
           +H+L + +KN   NNY
Sbjct: 486 FHILQFITKNGTSNNY 501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,872
Number of Sequences: 438
Number of extensions: 3626
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -