Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7b10
         (444 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40952-4|AAN39681.1|  131|Caenorhabditis elegans Hypothetical pr...    30   0.66 
U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine rece...    29   1.5  
Z78065-2|CAB01516.2|  145|Caenorhabditis elegans Hypothetical pr...    27   6.1  
Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical pr...    27   6.1  
AF016418-5|AAK18900.1|  278|Caenorhabditis elegans Hypothetical ...    27   6.1  
AF039042-7|AAC48250.1|  336|Caenorhabditis elegans Seven tm rece...    27   8.1  

>U40952-4|AAN39681.1|  131|Caenorhabditis elegans Hypothetical
           protein C03B1.6 protein.
          Length = 131

 Score = 30.3 bits (65), Expect = 0.66
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 368 FCSGIFRSYYKINFFEFCIFAIIFYVVIHSHN 273
           F S +FR ++ +N F F +    F++ I+S N
Sbjct: 2   FISSVFRFFFLLNLFFFVVVLSYFFIQIYSQN 33


>U41263-6|AAC24432.1|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 26 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = -2

Query: 356 IFRSYYKINFFEFCIFAIIFYVVIHSHNTQTYSNQC---QSCRTHNFRNLPPASFK*SNE 186
           + ++  K N F  C  A++ +  I+S   QT   +    Q  R+  F          S+E
Sbjct: 48  VVKTLIKNNIFSNCTRALLIFCSINSIVHQTTMMEVRIRQIYRSIVFDEDHCHILFNSSE 107

Query: 185 CITELYF--MTNYF 150
           C+ ELYF  MTNYF
Sbjct: 108 CVFELYFYYMTNYF 121


>Z78065-2|CAB01516.2|  145|Caenorhabditis elegans Hypothetical
           protein T09E8.3 protein.
          Length = 145

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -2

Query: 320 FCIFAIIFYVVIHSHNTQTYSNQCQSCRTHNFRNLP 213
           FCIF  I+ V+        Y N  + CR  N   LP
Sbjct: 19  FCIFFAIYTVICVDELRTDYKNPIEQCRNLNQLILP 54


>Z77661-2|CAB01184.4|  265|Caenorhabditis elegans Hypothetical
           protein F40G12.2 protein.
          Length = 265

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
 Frame = -2

Query: 299 FYVVIHSHNTQTYSNQCQSCRT--HNFRN---LPPASFK*SNECITELYFMTNYFW 147
           FY ++   N    + Q +   T  HN  N   +PP+    S E   +++F+++ FW
Sbjct: 172 FYKIVQDMNMYNCTGQFEFMSTCLHNITNTCAIPPSFLVKSQENCEKVHFLSSNFW 227


>AF016418-5|AAK18900.1|  278|Caenorhabditis elegans Hypothetical
           protein C49G7.5 protein.
          Length = 278

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 19/66 (28%), Positives = 32/66 (48%)
 Frame = -2

Query: 368 FCSGIFRSYYKINFFEFCIFAIIFYVVIHSHNTQTYSNQCQSCRTHNFRNLPPASFK*SN 189
           +C     +YY+ NFF+        + + H H  Q ++ QCQS  T++ R  P  S +  N
Sbjct: 117 YCIVSINNYYR-NFFDQ-------FPIRHLHQLQDHNYQCQS--TNSIRGQPFKSLQPEN 166

Query: 188 ECITEL 171
              T++
Sbjct: 167 RTPTQV 172


>AF039042-7|AAC48250.1|  336|Caenorhabditis elegans Seven tm
           receptor protein 160 protein.
          Length = 336

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 187 SVLPNCTL*PIIFGSGVMTSYSSRFLIIFFSCTVKIIVAFIFL 59
           S+L NC +  +IF S      S ++L+ +FS  +   VAF+ L
Sbjct: 19  SLLTNCVIIVLIFSSSPSKMGSYKYLLCYFS-MLSSFVAFLDL 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,295,169
Number of Sequences: 27780
Number of extensions: 193647
Number of successful extensions: 454
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 454
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)