Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7b02
         (727 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical ...    29   2.6  
AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm rece...    29   3.4  
Z92777-7|CAI79120.1|  294|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z81564-10|CAB04570.1|  180|Caenorhabditis elegans Hypothetical p...    28   7.8  

>CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical
           protein C50E10.9 protein.
          Length = 357

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 21/73 (28%), Positives = 34/73 (46%)
 Frame = -1

Query: 478 GNLYFLHVSNIDFILHIM*NNKQAANYGFGYLSDGELPSINNNEIDVVERCAYFSIYVHI 299
           G LY  H ++  F L  +   +  A+Y   YLSD E  +     I ++     FS    +
Sbjct: 128 GFLYTHHFASCLFFLFSVSMERAIASY---YLSDYERKTRPYISIAIIIVSMLFSSAYSV 184

Query: 298 YFVFNWFCLKLVI 260
           +F FN+F L  ++
Sbjct: 185 FFAFNFFNLTFIV 197


>AF101317-1|AAC69234.1|  330|Caenorhabditis elegans Seven tm
           receptor protein 16 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 473 ITYNISSNLRIYNKTQKLIVKVLESTIVPTINLQESTFLYPYFTSETNYYLQ 628
           I +  S  L   N+  K+++ +  +    TI+L    FLY YF     YYL+
Sbjct: 74  IFFTSSRPLNASNEVMKIMLVLYTAMYSTTISLLAVQFLYRYFAIFHEYYLK 125


>Z92777-7|CAI79120.1|  294|Caenorhabditis elegans Hypothetical
           protein C17H1.10 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 17/39 (43%), Positives = 26/39 (66%)
 Frame = -2

Query: 432 ILCRIISKQQTMALVIYPTESCLRSITMK*MLLKDVRIL 316
           +L  I S Q ++A VI   ESC++S+ +   LLKD++IL
Sbjct: 127 MLSNIESGQASLA-VIKHMESCIKSVNVISDLLKDLKIL 164


>AF040643-1|AAB94960.1|  998|Caenorhabditis elegans Hypothetical
            protein F14D2.6 protein.
          Length = 998

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
 Frame = +2

Query: 419  ILHNM*NEVYI*NVQEVKITYN---ISSNLRIYN----KTQKLIVKVLESTIVPTINLQE 577
            +L N  NE Y+ N++  K+ Y    + S  ++ N    +  + IV  LE++  P I L  
Sbjct: 821  VLINATNEEYVLNLKNTKVIYGLLVVKSTAKLENLDFLENLEQIVS-LENSTSPIIQLSS 879

Query: 578  STFLY---------PYFTSETNYYLQCVEN 640
            +  L          P F+ + N+Y++ V+N
Sbjct: 880  NKLLQNVNFPKIKTPLFSPKNNHYIEIVDN 909


>Z81564-10|CAB04570.1|  180|Caenorhabditis elegans Hypothetical
           protein K05C4.10 protein.
          Length = 180

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 349 EIDVVERCAYFSIYVHIYFV 290
           EI++  RC +FS + +I+FV
Sbjct: 2   EIEIKNRCIFFSFFYYIFFV 21


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,988,476
Number of Sequences: 27780
Number of extensions: 299293
Number of successful extensions: 605
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 581
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)