Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7a21
         (697 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0787 + 11180794-11180958,11181051-11181230,11181396-111816...    28   6.2  
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242           28   6.2  
04_01_0344 + 4517730-4517918,4518212-4518359,4518454-4518569,451...    28   8.1  
02_05_1272 + 35373843-35374031,35374343-35374490,35374586-353747...    28   8.1  
02_01_0039 - 271926-273503                                             28   8.1  

>03_02_0787 +
           11180794-11180958,11181051-11181230,11181396-11181611,
           11181693-11181875,11182013-11182234,11182434-11182550,
           11182682-11182825,11183198-11183299,11183762-11183830,
           11184283-11184516
          Length = 543

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 83  NRVMRSFEGKQWPYFRQFYFKQILK 9
           N V+  F+   W Y    YFKQI+K
Sbjct: 340 NNVLTDFDRDMWTYISLGYFKQIVK 364


>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
          Length = 417

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 8/81 (9%)
 Frame = +1

Query: 46  GH--CLPSNDLITRFECLPN---FPTGIFRCTTGETLGSGADKGCCYQ---CPEYFAYQH 201
           GH  C P  D +      P+   F T   RC   E + +  +  C Y    CP+  AY +
Sbjct: 56  GHLVCSPCRDNLPAGGKCPSPSCFGTPSVRCVAMERVVNSVEVACAYAEHGCPDKIAYAN 115

Query: 202 MTFYDLHLYLRPCRKPSAKTG 264
           +T ++      PC  P    G
Sbjct: 116 ITEHEKTCPHAPCFCPEPGCG 136


>04_01_0344 +
           4517730-4517918,4518212-4518359,4518454-4518569,
           4518917-4518979,4519084-4519152,4519317-4519352
          Length = 206

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 538 ISSVVKPAVGIGSKHWIII 594
           +  VVK AVG+G  HW+++
Sbjct: 47  LQGVVKKAVGLGGWHWLVL 65


>02_05_1272 +
           35373843-35374031,35374343-35374490,35374586-35374704,
           35374992-35375121,35375122-35375201
          Length = 221

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +1

Query: 538 ISSVVKPAVGIGSKHWIII 594
           +  VVK AVG+G  HW+++
Sbjct: 47  LQGVVKKAVGLGGWHWLVL 65


>02_01_0039 - 271926-273503
          Length = 525

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 115 FRCTTGETLGSGADKGCCYQCPEYFAYQH 201
           FR      +    +KG C+ CPE F+  H
Sbjct: 263 FRRLLAAEMAERREKGLCFNCPEKFSKDH 291


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,546,700
Number of Sequences: 37544
Number of extensions: 297962
Number of successful extensions: 656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)