Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7a18
         (697 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   3.7  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    23   3.7  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    22   4.8  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    22   4.8  

>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 363 FQIRVRVPS*PIQDAHQPFESFDQANR 443
           F   V + + P++D  +P E F+   R
Sbjct: 11  FMAMVAIMAAPVEDEFEPLEHFENEER 37


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +3

Query: 363 FQIRVRVPS*PIQDAHQPFESFDQANR 443
           F   V + + P++D  +P E F+   R
Sbjct: 11  FMAMVAIMAAPVEDEFEPLEHFENEER 37


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 281 PCSREGSSLVRTLSSTSFSSCN 216
           PC+ EG  L + L     + CN
Sbjct: 52  PCTNEGRELKKILPDALSTGCN 73


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 281 PCSREGSSLVRTLSSTSFSSCN 216
           PC+ EG  L + L     + CN
Sbjct: 52  PCTNEGRELKKILPDALSTGCN 73


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.130    0.348 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,478
Number of Sequences: 438
Number of extensions: 3954
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)