Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7a11
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81527-1|CAB04269.3|  290|Caenorhabditis elegans Hypothetical pr...    33   0.20 
U23514-11|AAM48531.1|  287|Caenorhabditis elegans Long protein 1...    33   0.26 
U23514-10|AAK95879.1|  301|Caenorhabditis elegans Long protein 1...    33   0.26 
U23514-9|AAC46538.1|  312|Caenorhabditis elegans Long protein 1,...    33   0.26 
AF078781-1|AAC26915.2|  258|Caenorhabditis elegans Hypothetical ...    33   0.26 
Z68108-3|CAA92137.1|  221|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of a...    29   3.2  
AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.      29   3.2  
AL032623-6|CAA21513.1|  198|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical pr...    28   7.5  
AF047651-9|AAC02720.2|  509|Caenorhabditis elegans Hypothetical ...    28   7.5  
Z81537-2|CAB04373.1|  682|Caenorhabditis elegans Hypothetical pr...    27   9.9  
Z48006-4|CAA88048.1|  429|Caenorhabditis elegans Hypothetical pr...    27   9.9  
U42839-2|AAC69015.1|  425|Caenorhabditis elegans Venom-allergen-...    27   9.9  
U42839-1|AAM54195.1|  424|Caenorhabditis elegans Venom-allergen-...    27   9.9  
AF112356-1|AAD27559.1|  425|Caenorhabditis elegans venom allerge...    27   9.9  

>Z81527-1|CAB04269.3|  290|Caenorhabditis elegans Hypothetical
           protein F35E12.1 protein.
          Length = 290

 Score = 33.1 bits (72), Expect = 0.20
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +2

Query: 263 FVAMGLANFLPQAADMKEIIWSQELANFAQRWVDQCDQN 379
           F+A G+    P A+DM +I W   +A  AQ ++++C  N
Sbjct: 124 FLAKGIEK--PPASDMMKISWDDSIAESAQTFIEKCPMN 160


>U23514-11|AAM48531.1|  287|Caenorhabditis elegans Long protein 1,
           isoform c protein.
          Length = 287

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 299 AADMKEIIWSQELANFAQRWVDQCD 373
           A+DM  + WS ELA  AQR  D CD
Sbjct: 97  ASDMNMLYWSDELAASAQRHADTCD 121


>U23514-10|AAK95879.1|  301|Caenorhabditis elegans Long protein 1,
           isoform b protein.
          Length = 301

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 299 AADMKEIIWSQELANFAQRWVDQCD 373
           A+DM  + WS ELA  AQR  D CD
Sbjct: 97  ASDMNMLYWSDELAASAQRHADTCD 121


>U23514-9|AAC46538.1|  312|Caenorhabditis elegans Long protein 1,
           isoform a protein.
          Length = 312

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +2

Query: 299 AADMKEIIWSQELANFAQRWVDQCD 373
           A+DM  + WS ELA  AQR  D CD
Sbjct: 97  ASDMNMLYWSDELAASAQRHADTCD 121


>AF078781-1|AAC26915.2|  258|Caenorhabditis elegans Hypothetical
           protein B0545.3 protein.
          Length = 258

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
 Frame = +2

Query: 233 IVSRINERRNFVAMGLA----NFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQPDKED 400
           I+ + NE R+ VA+G      ++LP A +M ++ W  EL   AQ+   QC  N+Q +   
Sbjct: 53  ILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQC--NLQKENSG 110

Query: 401 ICRDLVNAKVGQNIATILGTTTGLNVKSFV 490
              +  +   G+N A    TT GL+V   V
Sbjct: 111 RQMNGWDEVRGEN-AFYFRTTDGLDVSGAV 139


>Z68108-3|CAA92137.1|  221|Caenorhabditis elegans Hypothetical
           protein T05A10.4 protein.
          Length = 221

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = +2

Query: 233 IVSRINERRNFVAMGLAN----FLPQAADMKEIIWSQELANFAQRWVDQCDQNIQP 388
           I++  NE R  +A G        +  A +M ++ W  ELA+ A  W   C Q+  P
Sbjct: 74  ILTTHNELRRSLAFGKQRNKRGLMNGARNMYKLDWDCELASLAANWSTSCPQHFMP 129


>U41625-5|AAA83327.1|  700|Caenorhabditis elegans Suppressor of
           activated let-60ras protein 5 protein.
          Length = 700

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 497 WFMPILTYKGNVAYYNECPWAPVT 568
           W +  L  KG+V  ++ECP AP T
Sbjct: 369 WMISFLYSKGSVVLFDECPLAPDT 392


>AY091467-1|AAM44123.1|  700|Caenorhabditis elegans SUR-5 protein.
          Length = 700

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 497 WFMPILTYKGNVAYYNECPWAPVT 568
           W +  L  KG+V  ++ECP AP T
Sbjct: 369 WMISFLYSKGSVVLFDECPLAPDT 392


>AL032623-6|CAA21513.1|  198|Caenorhabditis elegans Hypothetical
           protein Y43F8B.5 protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
 Frame = +2

Query: 230 QIVSRINERRNFVAMGLANF-------LPQAADMKEIIWSQELANFAQRWVDQCDQNIQP 388
           +IV+ IN+ R+ VA    +        LP A+DM ++ W+  LA  AQ+    C   ++ 
Sbjct: 25  EIVTYINDLRSLVASRRFHLDSRDVETLPPASDMLKMTWNSTLAVAAQKLAKTCFIAVES 84

Query: 389 DKEDICRDLVNAKVGQNIATILGTTTG 469
               I    +   V  N+ T+     G
Sbjct: 85  SSPGIADKRI---VAANVVTVAKNALG 108


>Z81563-3|CAB04565.1|  222|Caenorhabditis elegans Hypothetical
           protein K04H8.3 protein.
          Length = 222

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 326 SQELANFAQRWVDQCDQNIQPDKEDICR 409
           SQ+L  F  +W+ QCDQN Q   ++  R
Sbjct: 155 SQDLT-FLTKWMRQCDQNDQDQNQEAMR 181


>AF047651-9|AAC02720.2|  509|Caenorhabditis elegans Hypothetical
           protein C05D2.3 protein.
          Length = 509

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -2

Query: 607 RW-VDELTAHLVLSGYWSPWTFIVIGDVSLIRQYRHKPHIHETF 479
           +W ++  + HL    YW+P    +     +I  Y H P + + F
Sbjct: 175 QWLINSTSEHLRSISYWTPVNRTIHDSTDIITPYYHDPRVFKNF 218


>Z81537-2|CAB04373.1|  682|Caenorhabditis elegans Hypothetical
           protein F41D3.2 protein.
          Length = 682

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 404 RYLLYLVEYFGRIDQPNVE 348
           +Y +Y++  F RIDQP+VE
Sbjct: 561 KYKIYIMNAFPRIDQPSVE 579


>Z48006-4|CAA88048.1|  429|Caenorhabditis elegans Hypothetical
           protein F19C6.3 protein.
          Length = 429

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = +2

Query: 101 CRSIADYCKI--CRNHTLCLYSSTGPGDQCD 187
           CR  A +C +  C  +  C  S  GP   CD
Sbjct: 335 CRDFARFCAVKPCHKYATCTDSKRGPKCSCD 365


>U42839-2|AAC69015.1|  425|Caenorhabditis elegans
           Venom-allergen-like protein protein1, isoform a protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +2

Query: 248 NERRNFVAMGL----ANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQ 385
           N+ R  +A GL       L    ++ E+ W  E+   AQ W D C  + Q
Sbjct: 41  NDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGCPSSFQ 90


>U42839-1|AAM54195.1|  424|Caenorhabditis elegans
           Venom-allergen-like protein protein1, isoform b protein.
          Length = 424

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +2

Query: 248 NERRNFVAMGL----ANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQ 385
           N+ R  +A GL       L    ++ E+ W  E+   AQ W D C  + Q
Sbjct: 41  NDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGCPSSFQ 90


>AF112356-1|AAD27559.1|  425|Caenorhabditis elegans venom
           allergen-like protein protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +2

Query: 248 NERRNFVAMGL----ANFLPQAADMKEIIWSQELANFAQRWVDQCDQNIQ 385
           N+ R  +A GL       L    ++ E+ W  E+   AQ W D C  + Q
Sbjct: 41  NDARRSMAKGLEPNKCGLLSGGKNVYELNWDCEMEAKAQEWADGCPSSFQ 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,814,020
Number of Sequences: 27780
Number of extensions: 324477
Number of successful extensions: 830
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)