Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7a07
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    33   0.16 
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    33   0.16 
Z81567-5|CAB04588.2|  154|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF003385-1|AAB54243.1|  884|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 242 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPA 111
           GPA GA   +PSR     +  +P +T R P+ TP+  P + +P+
Sbjct: 14  GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPS 57


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = -3

Query: 242 GPADGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPA 111
           GPA GA   +PSR     +  +P +T R P+ TP+  P + +P+
Sbjct: 143 GPAAGASAKTPSRMPARSVPQKPVTTMRTPAATPAAPPTRPTPS 186


>Z81567-5|CAB04588.2|  154|Caenorhabditis elegans Hypothetical
           protein K08C9.7 protein.
          Length = 154

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -3

Query: 215 SPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLNR 87
           SPS K+F     E G   R P+G P++S Q+ +  +QP TL +
Sbjct: 107 SPSPKYFKID--ENGKISRLPTGIPTVSIQREAFMTQPTTLRK 147


>Z93373-3|CAD54120.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = -3

Query: 668 SAGRDRSRLGQSLPHSAGVTSLHNRLTVPSQSNRQTVTLFPHNTRQSRSFCF-ERVQLYN 492
           S  +  SRLG+S P+ + +   H +L++   +       F  +T   +  C  E +  +N
Sbjct: 85  SVDKRHSRLGESSPNLSRIHHTHTQLSLGLPNKMNQTNDFFSSTEYCQYVCSREDIDSFN 144

Query: 491 GNCP-H*CRFQPLERIRKRSNKSSECGNKLN*ITRKH 384
           GN        QP++    R ++    G  L+ ++  H
Sbjct: 145 GNSTGGKSSEQPIQAAFLRKSRKDGGGLHLDDVSTSH 181


>Z83245-12|CAD54180.1|  449|Caenorhabditis elegans Hypothetical
           protein ZK131.11b protein.
          Length = 449

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
 Frame = -3

Query: 668 SAGRDRSRLGQSLPHSAGVTSLHNRLTVPSQSNRQTVTLFPHNTRQSRSFCF-ERVQLYN 492
           S  +  SRLG+S P+ + +   H +L++   +       F  +T   +  C  E +  +N
Sbjct: 85  SVDKRHSRLGESSPNLSRIHHTHTQLSLGLPNKMNQTNDFFSSTEYCQYVCSREDIDSFN 144

Query: 491 GNCP-H*CRFQPLERIRKRSNKSSECGNKLN*ITRKH 384
           GN        QP++    R ++    G  L+ ++  H
Sbjct: 145 GNSTGGKSSEQPIQAAFLRKSRKDGGGLHLDDVSTSH 181


>Z83108-2|CAB05510.1|  820|Caenorhabditis elegans Hypothetical
           protein F44E5.2 protein.
          Length = 820

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +2

Query: 20  CGAHVFACVVNFFG-CSRLPP 79
           C  H+F C + FFG CSR  P
Sbjct: 555 CDRHIFRCSIPFFGFCSRCEP 575


>AF003385-1|AAB54243.1|  884|Caenorhabditis elegans Hypothetical
           protein R08F11.1 protein.
          Length = 884

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +1

Query: 547 GNRVTVCLFDCDGTVRRL*SEV 612
           G++VT CLFD +GT  RL S++
Sbjct: 305 GSKVTTCLFDPNGTGGRLWSDL 326


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,846,631
Number of Sequences: 27780
Number of extensions: 401544
Number of successful extensions: 1212
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1212
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)