Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7a05
(590 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 32 0.072
SPAC25B8.05 |||pseudouridylate synthase |Schizosaccharomyces pom... 28 1.2
SPAC23H4.10c |thi4||thiamine-phosphate dipyrophosphorylase/hydro... 28 1.2
SPBC646.13 |sds23|psp1, moc1|inducer of sexual development Sds23... 27 1.5
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 27 1.5
SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr 1... 27 2.7
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 26 3.6
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 3.6
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 26 3.6
SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2 |Schizosacch... 26 4.7
SPBC1604.20c |tea2|klp4|kinesin-like protein Tea2|Schizosaccharo... 26 4.7
SPAC1635.01 |||voltage-dependent anion-selective channel|Schizos... 26 4.7
SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 6.2
SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces pom... 25 6.2
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 25 6.2
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 25 8.3
SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr 1|... 25 8.3
SPAC31G5.10 |eta2||Myb family transcriptional regulator Eta2|Sch... 25 8.3
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 31.9 bits (69), Expect = 0.072
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = +2
Query: 170 WSNNDALSTDLPDFAISP---QEYITEIGQYLMTLPQHLELHLSEKQAP-WQ 313
WSN + L D P + +SP Y+ ++G +L Q L LHL +++A WQ
Sbjct: 182 WSNEEKLFEDYPQYYMSPLFKAYYLIQLGFWLQ---QILVLHLEQRRADHWQ 230
>SPAC25B8.05 |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/47 (27%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -1
Query: 527 NFDCVEPAWQLATNSPSSSTLVSRKTLD-LQLRWTGIQYQ*DISSFL 390
+FD +E W L T+SP+++ +++ T + + +W ++ + I+SF+
Sbjct: 336 DFDNIE--WTLPTDSPTTAPRIAKHTYETIYHQWHSLRIREQIASFM 380
>SPAC23H4.10c |thi4||thiamine-phosphate
dipyrophosphorylase/hydroxyethylthiazole kinase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 518
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 205 RLRDFAPRIHHRDRTVPDDFAATSRIA 285
+L+DF P IHH V +F+A +A
Sbjct: 248 KLKDFTPLIHHLTNAVAKNFSANVTLA 274
>SPBC646.13 |sds23|psp1, moc1|inducer of sexual development
Sds23/Moc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 27.5 bits (58), Expect = 1.5
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 219 EIAKSGRSVDNASLLLHTASCDILSSCNSTGCRSIDLARER 97
E+AK G++ D+ + HT S L+ S+G R + + E+
Sbjct: 134 EVAKLGKNKDDFITIPHTTSLGRLAEILSSGIRRVAVTNEQ 174
>SPAC23D3.13c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1616
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 107 AKSILRHPVELQLDKISQLAVWSNNDALSTDLPDFAISPQEYITEIGQ 250
AK I RH + + L+ I LA+ NDALS D+ + + + ++GQ
Sbjct: 66 AKKIERH-IYISLNSIQLLAI---NDALSPDILESLFNSLNAVIQLGQ 109
>SPAC12B10.05 |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 486
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 371 IKNMDALGTKRCLTDIVYLSSVVEDLGSSV 460
+K + GTKR +TDI+Y S+ ++G +
Sbjct: 384 LKQVGIHGTKREITDILYPHSIGHEIGLEI 413
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 26.2 bits (55), Expect = 3.6
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +3
Query: 60 GRRPPYDA---RGNTYALSPSLYCGTRSNCNSIRYRNWPCGVTMMR-YPPTSQTSRFRPK 227
G P + A +GN + +L+ + ++ NS YRN G T+ + P SQ R R
Sbjct: 94 GASPTHSASPRQGNNTGANGALFSQSTNSSNSGSYRNSVTGATLPNAHAPHSQNRRRRSN 153
Query: 228 --NTSPRSDST 254
N P + T
Sbjct: 154 HLNNPPEAPIT 164
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 26.2 bits (55), Expect = 3.6
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -3
Query: 348 VSHVWLHTSVKNCQGACFSD--KCNSRCCGKVIRYCPISV-MYSWGEIAKSGRSVDNASL 178
V H WL++S KN F+D I CP++V S+ + KS + N+ +
Sbjct: 377 VHHSWLYSSFKNLSSQAFTDFPVPLDDSYMDFIFPCPLNVEKGSFEDTLKSSLTKGNSEV 436
Query: 177 LLHTASCDILSS 142
LL S +SS
Sbjct: 437 LLDDLSDPSVSS 448
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 398 KRCLTDIVYLSSVVEDLGSSVTPALKNLENSLRAATPALHSQ 523
K C + +V LS +E++ ++ L+NSL+ PA H +
Sbjct: 984 KLCQSFLVALSKNIENIPYALCYTAAQLKNSLQRYFPAAHKE 1025
>SPAC9.03c |brr2|spp41|U5 snRNP complex subunit Brr2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2176
Score = 25.8 bits (54), Expect = 4.7
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 226 LGR-NREVWEVGG*RIIVTPHGQLRYLIELQFDRVP 122
LGR R ++ G II+T H +L+Y + L ++P
Sbjct: 892 LGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQLP 927
>SPBC1604.20c |tea2|klp4|kinesin-like protein
Tea2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 628
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3
Query: 474 FNAGVTEDPRSSTTLDRYT 418
F+ GVTE S TLDRYT
Sbjct: 72 FDLGVTEKLMSPGTLDRYT 90
>SPAC1635.01 |||voltage-dependent anion-selective
channel|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 4.7
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = +3
Query: 102 LSPSLYCGTRSNCNSIRYRNWPCGVTMMRYPPTS 203
++P Y CN + R++P G T++ T+
Sbjct: 1 MAPPAYAAINKLCNDLLQRDFPVGATLLSVRTTA 34
>SPAC15A10.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 190
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 235 HRDRTVPDDFAATSRIAFVRETSALAVLDRCVQ-PHVRNVC 354
H RT DDF T+ F+ +++V+ R V+ P ++++C
Sbjct: 6 HITRTQVDDFPTTTNF-FLTNILSMSVVFRTVEDPELKSIC 45
>SPBC4.05 |mlo2||zinc finger protein Mlo2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 6.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 326 VCNHTCETYADKIMNIKNMDALGTKR 403
VC+ E Y D ++N K+ GT+R
Sbjct: 172 VCSECSEKYRDHLLNQKHESIAGTER 197
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 25.4 bits (53), Expect = 6.2
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +3
Query: 75 YDARGNTYALSPSLYCGTRSNCNSIRYRNWPCGVTMMRYPPTSQTS 212
Y R TY L P + N +S+ +P G T++R P T+
Sbjct: 225 YSLRHGTYMLDPFVKVWDLRNLSSLVPIPFPAGPTIIRMHPKLSTT 270
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 542 TFIYANFDCVEPAWQLATNSPSSSTL 465
TF+ A+ D W L+TN P ++L
Sbjct: 2309 TFLTASLDLTLRLWTLSTNKPIKASL 2334
>SPAC17G6.12 |cul1|pcu1|cullin 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 8.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 350 YADKIM--NIKNMDALGTKRCLTDIVYLSSVVED 445
YAD I+ + KN+D + CL+ I+ + VED
Sbjct: 420 YADSILRKSNKNVDIDDVEDCLSSIIIIFRYVED 453
>SPAC31G5.10 |eta2||Myb family transcriptional regulator
Eta2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 521 DCVEPAWQLATNSPSSSTLV 462
DC+E QL NSP SS +V
Sbjct: 105 DCMEATRQLLENSPLSSVVV 124
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,416,816
Number of Sequences: 5004
Number of extensions: 49868
Number of successful extensions: 185
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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