Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte7a03
(245 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80441-5|AAB37654.1| 207|Caenorhabditis elegans Atp synthase su... 64 1e-11
U80441-4|AAR25649.1| 228|Caenorhabditis elegans Atp synthase su... 64 1e-11
AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical ... 28 0.76
Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical pr... 27 1.3
Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical pr... 27 1.3
U80024-3|AAK18893.1| 342|Caenorhabditis elegans Seven tm recept... 25 7.1
AF016684-17|AAB66201.1| 463|Caenorhabditis elegans Hypothetical... 25 7.1
AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical ... 25 7.1
Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical p... 25 9.4
Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical pr... 25 9.4
Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical pr... 25 9.4
U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide tr... 25 9.4
AL110482-5|CAB60338.2| 704|Caenorhabditis elegans Hypothetical ... 25 9.4
AL021567-3|CAA16509.2| 650|Caenorhabditis elegans Hypothetical ... 25 9.4
AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity ... 25 9.4
>U80441-5|AAB37654.1| 207|Caenorhabditis elegans Atp synthase
subunit protein 3,isoform a protein.
Length = 207
Score = 64.5 bits (150), Expect = 1e-11
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +3
Query: 3 AQRQNLEAALKKFLKGNETLQLTAKVDPSLIGGMVVSIGDKYVDMSVASXVKKYTELISA 182
+ ++ L AL K K + L +T V PS++GG+VV+IGDKYVD+S+AS VKKY + ++
Sbjct: 146 SNQKALSDALSKIGKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIASRVKKYKDALAT 205
Query: 183 AV 188
A+
Sbjct: 206 AI 207
>U80441-4|AAR25649.1| 228|Caenorhabditis elegans Atp synthase
subunit protein 3,isoform b protein.
Length = 228
Score = 64.5 bits (150), Expect = 1e-11
Identities = 29/62 (46%), Positives = 44/62 (70%)
Frame = +3
Query: 3 AQRQNLEAALKKFLKGNETLQLTAKVDPSLIGGMVVSIGDKYVDMSVASXVKKYTELISA 182
+ ++ L AL K K + L +T V PS++GG+VV+IGDKYVD+S+AS VKKY + ++
Sbjct: 167 SNQKALSDALSKIGKSGQKLTVTYAVKPSILGGLVVTIGDKYVDLSIASRVKKYKDALAT 226
Query: 183 AV 188
A+
Sbjct: 227 AI 228
>AF016670-5|AAB66104.1| 1193|Caenorhabditis elegans Hypothetical
protein K02F6.4 protein.
Length = 1193
Score = 28.3 bits (60), Expect = 0.76
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +3
Query: 12 QNLEAALKKFLKGNETLQLTAKVDPSLIGGMVVS 113
QNL ++KK L G T + T +DP+ + ++ S
Sbjct: 579 QNLYFSVKKSLDGKRTRRATGSIDPTKLPNLLAS 612
>Z81516-7|CAB04207.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 12 QNLEAALKKFL-KGNETLQ---LTAKVDPSLIGGMVVSIGDKYVDM 137
QNL L++ + KG ETL+ + + + I G V++ GD +VD+
Sbjct: 323 QNLNETLQRSIQKGQETLEAKGIESGTNILAINGRVIAKGDSFVDL 368
>Z81467-6|CAB03874.1| 1377|Caenorhabditis elegans Hypothetical
protein F26H9.8 protein.
Length = 1377
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 12 QNLEAALKKFL-KGNETLQ---LTAKVDPSLIGGMVVSIGDKYVDM 137
QNL L++ + KG ETL+ + + + I G V++ GD +VD+
Sbjct: 323 QNLNETLQRSIQKGQETLEAKGIESGTNILAINGRVIAKGDSFVDL 368
>U80024-3|AAK18893.1| 342|Caenorhabditis elegans Seven tm receptor
protein 190 protein.
Length = 342
Score = 25.0 bits (52), Expect = 7.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = -2
Query: 100 PPINEGSTLAVSCRVSLPFRNFLSAASKF 14
P ++E +++ V C V LP N +KF
Sbjct: 151 PDMDEYASIIVDCTVGLPIENVTYFGAKF 179
>AF016684-17|AAB66201.1| 463|Caenorhabditis elegans Hypothetical
protein F45C12.1 protein.
Length = 463
Score = 25.0 bits (52), Expect = 7.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
Frame = -1
Query: 143 YTHVDIFIPN*NNHAT------NQ*RIHFSCKLQSFIALQE 39
+ H+D+ I N HAT N RIH +CK Q +L++
Sbjct: 313 HMHLDLEIQFQNLHATYCPDFENSGRIHRACKFQQLSSLEK 353
>AF016670-6|AAB66103.2| 839|Caenorhabditis elegans Hypothetical
protein K02F6.3 protein.
Length = 839
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 12 QNLEAALKKFLKGNETLQLTAKVDPSLIGGMVVS 113
QNL ++KK L T + T +DP+ + ++ S
Sbjct: 585 QNLYFSVKKSLDEKRTRRATGSIDPAKLPNLLAS 618
>Z14092-11|CAI46627.1| 817|Caenorhabditis elegans Hypothetical
protein R107.4d protein.
Length = 817
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 145 QVXSRNTLSLSVLLFKPKFH 204
Q SRNT+ S+ L +P+FH
Sbjct: 673 QGCSRNTMQKSMHLLRPEFH 692
>Z14092-5|CAD45600.1| 816|Caenorhabditis elegans Hypothetical
protein R107.4c protein.
Length = 816
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 145 QVXSRNTLSLSVLLFKPKFH 204
Q SRNT+ S+ L +P+FH
Sbjct: 673 QGCSRNTMQKSMHLLRPEFH 692
>Z14092-4|CAD45599.1| 820|Caenorhabditis elegans Hypothetical
protein R107.4b protein.
Length = 820
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 145 QVXSRNTLSLSVLLFKPKFH 204
Q SRNT+ S+ L +P+FH
Sbjct: 673 QGCSRNTMQKSMHLLRPEFH 692
>Z14092-3|CAA78473.3| 754|Caenorhabditis elegans Hypothetical
protein R107.4a protein.
Length = 754
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 145 QVXSRNTLSLSVLLFKPKFH 204
Q SRNT+ S+ L +P+FH
Sbjct: 673 QGCSRNTMQKSMHLLRPEFH 692
>U39666-2|AAA80411.2| 835|Caenorhabditis elegans Oligopeptide
transporter protein 2 protein.
Length = 835
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 172 SSVYFLTXLATLMSTYLSPIETTMPPINEGS 80
S YF +++ST++SPI + P + + S
Sbjct: 186 SMFYFSINAGSMISTFISPIFRSQPCLGQDS 216
>AL110482-5|CAB60338.2| 704|Caenorhabditis elegans Hypothetical
protein Y39G8B.5 protein.
Length = 704
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +1
Query: 145 QVXSRNTLSLSVLLFKPKFH 204
Q SRNT+ S+ L +P+FH
Sbjct: 644 QGCSRNTMEKSMHLLRPEFH 663
>AL021567-3|CAA16509.2| 650|Caenorhabditis elegans Hypothetical
protein F21A10.4 protein.
Length = 650
Score = 24.6 bits (51), Expect = 9.4
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = -1
Query: 164 VFLDXTCYTHVDIFIPN*NNHATNQ*RIHFSCKLQSFIALQE 39
+FL+ T + H + I + HF+CKL + ++E
Sbjct: 161 IFLEKTAFCHNEEIIVGWELNTEKSVIEHFTCKLAQLVEVRE 202
>AF000418-1|AAC39119.1| 796|Caenorhabditis elegans low-affinity
peptide transporter protein.
Length = 796
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 172 SSVYFLTXLATLMSTYLSPIETTMPPINEGS 80
S YF +++ST++SPI + P + + S
Sbjct: 147 SMFYFSINAGSMISTFISPIFRSQPCLGQDS 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,197,340
Number of Sequences: 27780
Number of extensions: 84655
Number of successful extensions: 211
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 12,740,198
effective HSP length: 61
effective length of database: 11,045,618
effective search space used: 220912360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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