Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte7a03
         (245 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    20   3.9  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            19   6.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              19   6.9  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               19   9.1  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    19   9.1  

>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 20.2 bits (40), Expect = 3.9
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 106 TMPPINEGSTLAVSCRVSLP 47
           T  P N G+T+  S  + LP
Sbjct: 268 TFCPTNLGTTVRASVHIKLP 287


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 48  GNETLQLTAKVDPS 89
           GN+TL+   ++DP+
Sbjct: 77  GNDTLKSKMEIDPA 90


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 19.4 bits (38), Expect = 6.9
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = -2

Query: 115 IETTMPPINEGSTLAVSCRVSLPFRNFLSAASKFC 11
           +  T+PP  + S++     ++   R+    ASK+C
Sbjct: 53  LSMTIPPSIDRSSIHEESYLAESSRSIDPCASKYC 87


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 83 IHFSCKLQSFIALQEFLK 30
          IH     + FI +QE L+
Sbjct: 42 IHMGLTFKDFIKMQELLQ 59


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 19.0 bits (37), Expect = 9.1
 Identities = 12/56 (21%), Positives = 24/56 (42%)
 Frame = -2

Query: 181 ALISSVYFLTXLATLMSTYLSPIETTMPPINEGSTLAVSCRVSLPFRNFLSAASKF 14
           A+I +++      +  S  L   +     IN   +++ SC ++      +S  SKF
Sbjct: 213 AMIGTIFLWLFWPSFNSAALEGDDQQRAIINTLLSISASCVIAFATSALVSKDSKF 268


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,551
Number of Sequences: 438
Number of extensions: 915
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  4275738
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)