Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6p19
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...   113   4e-27
AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B prot...    27   0.74 
AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450 pr...    24   5.2  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   6.9  
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    23   6.9  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score =  113 bits (273), Expect = 4e-27
 Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 10/236 (4%)
 Frame = +3

Query: 12   LMRVYDPLGLLAPIVVKGRILFQQTW---RSNVD---WDTEFQPTEALRWSDWFQELSKV 173
            + ++YDPLG++  +  K +   Q+ W   + N D   WD E        W  + ++L+ +
Sbjct: 968  IAKIYDPLGIVDTVKAKAKQFMQRVWSLKKENGDSYGWDEEIPQQMRQEWEVFERQLTHL 1027

Query: 174  TSLEIPRWYS--NSKNSEPTQRELHVFADASELAYACVAYWRLLYSDGSIELSLISSKAR 347
              +++PR  +   ++N +     +H F DASE  Y    Y R    +  I   L  SK++
Sbjct: 1028 QEVQVPRCVTIVGARNIQ-----IHGFCDASEEGYGACVYVRSTNGE-EIVSRLFVSKSK 1081

Query: 348  VTPLKPI-SIPRLELQAALIASRLAVTIKDSHRKQPAHTFFWTDSMTVLQWLRNDARSFK 524
            VTPL    +I RLEL AA +  +L V +K +  + P  TF WTDS TV+ WL++    +K
Sbjct: 1082 VTPLATKHTIARLELCAAHLLGKLLVKLKRA-TEDPYETFCWTDSSTVIYWLKSSPSRWK 1140

Query: 525  PFVAHRLGEIIENSCVRDWRWVPTDLNVADDATRTRS-INLDMSHRWFRGPSFLFK 689
             FVA+R+ +I   +   +WR VP   N AD  +R R+   +     W+ GP +L K
Sbjct: 1141 TFVANRVSQIQNATKEFEWRHVPGIHNPADAVSRGRNPAEVVEDKLWWHGPDWLVK 1196


>AY752897-1|AAV30071.1|  107|Anopheles gambiae peroxidase 4B
           protein.
          Length = 107

 Score = 26.6 bits (56), Expect = 0.74
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +3

Query: 132 ALRWSDWFQELSKVTSLEIPRWYSNSKNSE 221
           A RW D + E+ + T   + RWY    + E
Sbjct: 33  ATRWEDLYGEIPRATVDRLARWYDTVDDVE 62


>AY748840-1|AAV28188.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = -2

Query: 586 HRQSLTQEFSIISPKRWATKGLKERASLRNH*RTVIESVQKKVCAG 449
           H++ +  E     P+R+ +   +++     H R+V     K+VCAG
Sbjct: 57  HQEDVFPEPHTFRPERFLSDDGQQQQLALEHDRSVPFGAGKRVCAG 102


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 291  RLLYSDGSIELSLISSKARVTPLKPISIPRLELQAALIASRLAVTIKDS 437
            RLL       L   +++ R+  L+P+S+ R   Q + IA  L  +I  S
Sbjct: 931  RLLPWQDRNNLPPYAARCRLLGLEPLSVRRRNAQCSFIAGLLNGSIDSS 979


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
           anion exchanger protein.
          Length = 1102

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 300 IKGANKRHMRTRAHLHQQ 247
           I G+++RH + R H H Q
Sbjct: 42  IPGSSRRHSQRRRHKHHQ 59


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,848
Number of Sequences: 2352
Number of extensions: 13565
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)