Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6p19
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...   111   6e-25
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...   111   6e-25
U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical pr...    55   4e-08
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    51   7e-07
Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U42847-2|AAA83604.3|  430|Caenorhabditis elegans Hypothetical pr...    29   2.4  
AC084158-6|AAK68561.2|  190|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical pr...    28   5.5  

>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical protein
            F15D4.7 protein.
          Length = 2268

 Score =  111 bits (266), Expect = 6e-25
 Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 10/230 (4%)
 Frame = +3

Query: 24   YDPLGLLAPIVVKGRILFQQTWRSNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYS 203
            +DPLGL+ PI+V  ++L QQ W S V W T+        W    +E+ +   + +PR  +
Sbjct: 1369 FDPLGLVTPIIVHFKLLIQQIWESKVTWKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLT 1427

Query: 204  NSKNSEPTQRELHVFADASELAYACVAYWRLLYSDGSIELSLISSKARVTP--LKPISIP 377
            N  + E     + VF+DAS+  YA   Y +  Y D    + L++SK ++ P     ++IP
Sbjct: 1428 NDYDYESV--NILVFSDASKDIYATTIYLQYQYKDKPPVIQLLTSKNKIKPANCNTLTIP 1485

Query: 378  RLELQAALIASRLAVTIKDSHRKQPAHTFFWTDSMTVLQWLRNDARSFKPFVAHRLGEII 557
            ++EL A  I + LA +  +  R   A   F+TDS     W+ ++ ++ + +V++R+  I 
Sbjct: 1486 KMELLAINIGANLAYSTSEQLRLDVAEVIFFTDSSCASYWILSN-KTTRQWVSNRVETIY 1544

Query: 558  E-------NSCVRDWRWVPTDLNVADDATRTRSIN-LDMSHRWFRGPSFL 683
            +       +     +R  PT  N AD ATR  S N L     WF GP FL
Sbjct: 1545 QVKEKFATDGITSSFRHCPTKDNPADIATRGMSTNELQNCSFWFNGPEFL 1594


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
            protein F15D4.7 protein.
          Length = 2268

 Score =  111 bits (266), Expect = 6e-25
 Identities = 72/230 (31%), Positives = 115/230 (50%), Gaps = 10/230 (4%)
 Frame = +3

Query: 24   YDPLGLLAPIVVKGRILFQQTWRSNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPRWYS 203
            +DPLGL+ PI+V  ++L QQ W S V W T+        W    +E+ +   + +PR  +
Sbjct: 1369 FDPLGLVTPIIVHFKLLIQQIWESKVTWKTKIPGKLLTAWKK-IKEMYRDDKITVPRQLT 1427

Query: 204  NSKNSEPTQRELHVFADASELAYACVAYWRLLYSDGSIELSLISSKARVTP--LKPISIP 377
            N  + E     + VF+DAS+  YA   Y +  Y D    + L++SK ++ P     ++IP
Sbjct: 1428 NDYDYESV--NILVFSDASKDIYATTIYLQYQYKDKPPVIQLLTSKNKIKPANCNTLTIP 1485

Query: 378  RLELQAALIASRLAVTIKDSHRKQPAHTFFWTDSMTVLQWLRNDARSFKPFVAHRLGEII 557
            ++EL A  I + LA +  +  R   A   F+TDS     W+ ++ ++ + +V++R+  I 
Sbjct: 1486 KMELLAINIGANLAYSTSEQLRLDVAEVIFFTDSSCASYWILSN-KTTRQWVSNRVETIY 1544

Query: 558  E-------NSCVRDWRWVPTDLNVADDATRTRSIN-LDMSHRWFRGPSFL 683
            +       +     +R  PT  N AD ATR  S N L     WF GP FL
Sbjct: 1545 QVKEKFATDGITSSFRHCPTKDNPADIATRGMSTNELQNCSFWFNGPEFL 1594


>U64843-1|AAF98232.1| 1067|Caenorhabditis elegans Hypothetical protein
            K06C4.15 protein.
          Length = 1067

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
 Frame = +3

Query: 12   LMRVYDPLGLLAPIVVKGRILFQQTWRSNVDWDTEFQPTEALRWSDW--FQELSKVTSLE 185
            +   +DPLGL++PI V  +   Q   +  V+W     P   L   DW   Q      ++ 
Sbjct: 910  MAETFDPLGLISPIQVLMKRFIQ---KHEVNWKDPI-PKHLL--DDWQAIQASFIDRTIT 963

Query: 186  IPRWYSNSKNSEPTQRELHVFADASELAYACVAYWRLLYSDGSIE-LSLISSKARVTPLK 362
            +PR  +   + E  + +L +F+DAS+  YA  AY    Y D     +SLI+SK ++ P K
Sbjct: 964  VPRRLTT--DFEYKEIQLLIFSDASQDIYAAAAYAYFSYGDDRPPVISLITSKNKIKPSK 1021

Query: 363  PI--SIPRLELQAALIASRLAVTIKDSHRKQPAHTFFWTDSMTVL 491
                +IP+LEL    I S LA +I      +  +   +TDS   L
Sbjct: 1022 ETNWTIPKLELLGIEIGSNLASSIVKELSCKVTNIRLFTDSSCAL 1066


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 7/170 (4%)
 Frame = +3

Query: 21  VYDPLGLLAPIVVKGRILFQQTW--RSNVDWDTEFQPTEALRWSDWFQELSKVTSLEIPR 194
           +YDP+GLL P+++  ++  ++ W       WDT  +      +      + +  S +  R
Sbjct: 443 IYDPMGLLVPLLLPLKLFQRKLWIEEEKYGWDTPLKEKHEKEYKSITDNI-RGFSKDFNR 501

Query: 195 WYSNSKNSEPTQRELHVFADASELAYACVAYWRLLYSDGSIELSLISSKARVTPLK-PIS 371
            +   K+ E    E+  FADAS+ A A   Y +  Y      ++L+  K+ V  LK   +
Sbjct: 502 -HIIDKSGE---NEIIAFADASQEAIAACIYVKNKYG-----VNLLFGKSNVKSLKEKWT 552

Query: 372 IPRLELQAALIASRLAVT----IKDSHRKQPAHTFFWTDSMTVLQWLRND 509
           IP+LE+QA  +A+  A++    ++D   K       ++DS   L WLR++
Sbjct: 553 IPKLEVQALKVATDRALSTLTALQDGDIK-VTKVILFSDSEITLAWLRSE 601


>Z83234-2|CAB70170.2|  715|Caenorhabditis elegans Hypothetical
           protein K09E4.4 protein.
          Length = 715

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = +3

Query: 147 DWFQELSKVTSLEIPRWYSNSKNSEPTQRELHVF 248
           + FQ+L   ++ ++ +W  N+K+  PT  E  VF
Sbjct: 610 EMFQKLESYSNRDVRQWIENAKSIAPTSEERQVF 643


>U42847-2|AAA83604.3|  430|Caenorhabditis elegans Hypothetical
           protein F39H12.1 protein.
          Length = 430

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/19 (52%), Positives = 16/19 (84%)
 Frame = +3

Query: 612 DDATRTRSINLDMSHRWFR 668
           D++T+T+S+ +D SHRW R
Sbjct: 313 DESTQTKSVYIDESHRWER 331


>AC084158-6|AAK68561.2|  190|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.17 protein.
          Length = 190

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
 Frame = +3

Query: 459 TFFWTD---SMTVLQWLRNDARSFKPFVAHRLGEIIENSCVRDWRWV-PTDLNVA 611
           TFF+ D    +++ + L     S  PFV  ++G+ I    +RDW  + P+D+ +A
Sbjct: 29  TFFFEDLKKKISINECLILLRESKNPFVLFQIGQAIGEIVLRDWALIEPSDVQIA 83


>Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical
           protein F15D4.5 protein.
          Length = 491

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -2

Query: 139 LNASVGWNSVSQSTLDLHVC-*NKIRPLTTIGANKPNGSYTR 17
           +N++  WN+ +Q  ++ HVC  + I P      ++P+G Y +
Sbjct: 294 INSNKDWNNNTQEAINRHVCHLSTILPRMEAALHQPSGYYVQ 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,037,922
Number of Sequences: 27780
Number of extensions: 327978
Number of successful extensions: 792
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)