Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6p15
         (500 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U44902-1|AAA93318.1|  483|Caenorhabditis elegans serine/threonin...    28   4.4  
AC024770-7|AAP13756.1|  411|Caenorhabditis elegans Checkpoint ki...    28   4.4  
AC024770-6|AAF59485.2|  503|Caenorhabditis elegans Checkpoint ki...    28   4.4  
Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical p...    27   5.8  
Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical p...    27   5.8  

>U44902-1|AAA93318.1|  483|Caenorhabditis elegans serine/threonine
           kinase protein.
          Length = 483

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 86  NCGFYNIFNQFFFSKILCG 30
           +CG   +F QF+F +++CG
Sbjct: 119 DCGMSPVFAQFYFKQLICG 137


>AC024770-7|AAP13756.1|  411|Caenorhabditis elegans Checkpoint
          kinase protein 1, isoformb protein.
          Length = 411

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 86 NCGFYNIFNQFFFSKILCG 30
          +CG   +F QF+F +++CG
Sbjct: 27 DCGMSPVFAQFYFKQLICG 45


>AC024770-6|AAF59485.2|  503|Caenorhabditis elegans Checkpoint
           kinase protein 1, isoforma protein.
          Length = 503

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 86  NCGFYNIFNQFFFSKILCG 30
           +CG   +F QF+F +++CG
Sbjct: 119 DCGMSPVFAQFYFKQLICG 137


>Z70270-11|CAJ80821.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 236 LKNRHSFSFLNVKRRFLNCSKTADVNGLRDIYFTSIT 126
           L N  +  F+N K  F+N ++   + G R IY TS++
Sbjct: 488 LTNSQNLDFVNKKFTFMNKNQMETLYGERGIYNTSVS 524


>Z70270-10|CAA94231.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 236 LKNRHSFSFLNVKRRFLNCSKTADVNGLRDIYFTSIT 126
           L N  +  F+N K  F+N ++   + G R IY TS++
Sbjct: 488 LTNSQNLDFVNKKFTFMNKNQMETLYGERGIYNTSVS 524


>Z68215-18|CAJ80818.1|  606|Caenorhabditis elegans Hypothetical
           protein C53B4.8b protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 236 LKNRHSFSFLNVKRRFLNCSKTADVNGLRDIYFTSIT 126
           L N  +  F+N K  F+N ++   + G R IY TS++
Sbjct: 488 LTNSQNLDFVNKKFTFMNKNQMETLYGERGIYNTSVS 524


>Z68215-17|CAA92458.1|  726|Caenorhabditis elegans Hypothetical
           protein C53B4.8a protein.
          Length = 726

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 236 LKNRHSFSFLNVKRRFLNCSKTADVNGLRDIYFTSIT 126
           L N  +  F+N K  F+N ++   + G R IY TS++
Sbjct: 488 LTNSQNLDFVNKKFTFMNKNQMETLYGERGIYNTSVS 524


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,374,711
Number of Sequences: 27780
Number of extensions: 198532
Number of successful extensions: 407
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 397
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)