Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6p14
(675 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 307 1e-82
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 292 6e-78
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 247 2e-64
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 213 2e-54
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 206 4e-52
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 188 8e-47
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 188 1e-46
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 180 2e-44
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 169 7e-41
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 163 3e-39
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 148 1e-34
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 120 3e-26
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 101 2e-20
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 67 1e-18
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 95 2e-18
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 86 6e-16
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 57 2e-13
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 3e-12
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 3e-11
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 59 8e-08
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 47 3e-07
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 57 3e-07
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 6e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 8e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 3e-06
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.013
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.51
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 307 bits (754), Expect = 1e-82
Identities = 141/188 (75%), Positives = 155/188 (82%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
MGFVKVVKNKQYFK YQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 419
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 420 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 599
E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 600 PGYDAESK 623
PGY AE+K
Sbjct: 181 PGYSAETK 188
Score = 37.1 bits (82), Expect = 0.39
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 622 KKFNAEVHRAHIFGLHVA 675
K FNA+VHRAHIFG HVA
Sbjct: 188 KSFNADVHRAHIFGQHVA 205
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 292 bits (716), Expect = 6e-78
Identities = 133/189 (70%), Positives = 151/189 (79%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
MGFVKVVKNK YFK YQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 419
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 420 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 599
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 600 PGYDAESKK 626
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 247 bits (604), Expect = 2e-64
Identities = 117/189 (61%), Positives = 137/189 (72%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
MG VKV+KNK YFK YQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 419
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 420 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 599
+YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 600 PGYDAESKK 626
G+D ESK+
Sbjct: 180 FGFDQESKE 188
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 213 bits (521), Expect = 2e-54
Identities = 100/185 (54%), Positives = 122/185 (65%), Gaps = 2/185 (1%)
Frame = +3
Query: 75 VVKNKQYFKSYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 248
V K Y YQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 249 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 428
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 429 XXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 608
+Y+VE D F+C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF GY
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGY 192
Query: 609 DAESK 623
D + K
Sbjct: 193 DLQDK 197
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 206 bits (503), Expect = 4e-52
Identities = 100/196 (51%), Positives = 129/196 (65%), Gaps = 6/196 (3%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
M FVKVVKNK YFK +QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 419
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQ 143
Query: 420 XXXXXXXXEYNVEPVDNGPG------AFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 581
V + G F+ LDVGLARTTTGARVFG +KGAVDGG+ VP
Sbjct: 144 GAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVP 203
Query: 582 HSIKRFPGYDAESKKV 629
H RFPGY+ E +
Sbjct: 204 HRPNRFPGYNKEKSSL 219
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 188 bits (459), Expect = 8e-47
Identities = 92/189 (48%), Positives = 122/189 (64%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
M FVK+VK YFK +Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 419
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATG---LLLARRTLKTLKMDK 117
Query: 420 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 599
+ N++ P F LD+GL R+T G RVF A+KGA DGG+++PH+ +RF
Sbjct: 118 FYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRF 175
Query: 600 PGYDAESKK 626
PG+ ++ K
Sbjct: 176 PGFSVDNDK 184
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 188 bits (458), Expect = 1e-46
Identities = 96/185 (51%), Positives = 114/185 (61%), Gaps = 3/185 (1%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
M +VKVVKNK YFK YQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXX 410
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 411 XXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 590
E + + + +LDVG+ RTTTG RVF A+KGA DGGLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN 180
Query: 591 KRFPG 605
RFPG
Sbjct: 181 NRFPG 185
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 180 bits (439), Expect = 2e-44
Identities = 80/89 (89%), Positives = 86/89 (96%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
MGFVKVVKNKQYFK +QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 240 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 326
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
Score = 36.3 bits (80), Expect = 0.68
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +1
Query: 622 KKFNAEVHRAHIFGLHVA 675
K FNAE HRAHIFG HVA
Sbjct: 157 KTFNAEAHRAHIFGQHVA 174
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 169 bits (410), Expect = 7e-41
Identities = 77/166 (46%), Positives = 103/166 (62%)
Frame = +3
Query: 111 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 290
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 291 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 470
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 471 GPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 608
F+ LD GL RTTTG RVFG +KGA DGG+N+PHS RFPGY
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGY 472
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYY 152
+GFVKV+K K YFK +Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 163 bits (397), Expect = 3e-39
Identities = 83/175 (47%), Positives = 106/175 (60%)
Frame = +3
Query: 72 KVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 251
K+VKN YF +Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 252 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 431
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 432 XXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 596
EY + + P F+ LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 148 bits (358), Expect = 1e-34
Identities = 76/175 (43%), Positives = 105/175 (60%), Gaps = 1/175 (0%)
Frame = +3
Query: 87 KQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 266
+ Y K++QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 267 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 446
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATG--FLIGRRALTAMSLDEVYRPKEIDGT 121
Query: 447 YNV-EPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGY 608
Y+V + +D A R +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F G+
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKFYGH 176
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 120 bits (289), Expect = 3e-26
Identities = 63/134 (47%), Positives = 76/134 (56%)
Frame = +3
Query: 222 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 401
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 402 XXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 581
Y+VE +N F+ LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 582 HSIKRFPGYDAESK 623
HS KRFPGY + +
Sbjct: 124 HSEKRFPGYSVDEE 137
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 101 bits (241), Expect = 2e-20
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 239
+ FVK K + Y K +QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 240 TCQVAYSRIEGD 275
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 67.3 bits (157), Expect(2) = 1e-18
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +3
Query: 105 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 284
Y+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD ++
Sbjct: 7 YRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRVI 59
Query: 285 CAAYSHEL-PRYGVKVGLTNYAAAYSTG 365
AA+S EL ++G K N AAY TG
Sbjct: 60 AAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 48.8 bits (111), Expect(2) = 1e-18
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +3
Query: 477 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPG 605
G LDVGL + G+RVF A+KGA+D G+ +PHS + PG
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILPG 140
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 94.7 bits (225), Expect = 2e-18
Identities = 58/195 (29%), Positives = 96/195 (49%), Gaps = 3/195 (1%)
Frame = +3
Query: 84 NKQYFKSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 263
N Y +++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 264 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXX 443
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG-----------YYFGKDLIEKVKQSE 117
Query: 444 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS---IKRFPGYDA 614
YN + N +D+GL R T G + F +MKG+VD G+N+PH+ I + +
Sbjct: 118 TYNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKIFKVKNNEI 174
Query: 615 ESKKVQC*STQGSHL 659
+SK++ ++G H+
Sbjct: 175 DSKELFNERSKGIHI 189
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 86.2 bits (204), Expect = 6e-16
Identities = 62/166 (37%), Positives = 82/166 (49%)
Frame = +3
Query: 105 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 284
Y V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD +
Sbjct: 7 YFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDSTL 59
Query: 285 CAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPV 464
AAYS EL YG + + AAY TG + V+ +
Sbjct: 60 VAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKAL 94
Query: 465 DNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 602
+ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 95 NAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 56.8 bits (131), Expect(2) = 2e-13
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +3
Query: 105 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 284
Y+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD +
Sbjct: 7 YKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDTL 59
Query: 285 CAAYSHELPRYGVKVGLTNYAAAYSTG 365
+A+S +L YG + N +AY TG
Sbjct: 60 ASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 41.5 bits (93), Expect(2) = 2e-13
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 477 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 587
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +3
Query: 210 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 365
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 62.9 bits (146), Expect = 7e-09
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +3
Query: 504 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 626
GLARTTTG +VFGA+K VD GL++PHS K FPGYD+ SK+
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKE 111
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 47.2 bits (107), Expect(2) = 3e-11
Identities = 21/42 (50%), Positives = 26/42 (61%)
Frame = +3
Query: 477 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 602
G LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 100 GHSEAVLDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 43.6 bits (98), Expect(2) = 3e-11
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +3
Query: 99 KSYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 278
K+ +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 279 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 365
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 59.3 bits (137), Expect = 8e-08
Identities = 27/62 (43%), Positives = 42/62 (67%)
Frame = +3
Query: 444 EYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESK 623
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF G ++K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 624 KV 629
++
Sbjct: 102 QL 103
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 46.8 bits (106), Expect(2) = 3e-07
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Frame = +3
Query: 60 MGFVKVVKNKQYFKSYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 233
M + K++KN YF + VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 234 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 365
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
Score = 30.7 bits (66), Expect(2) = 3e-07
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 483 FRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 587
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 57.2 bits (132), Expect = 3e-07
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = +3
Query: 105 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 284
Y+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 7 YKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDITY 59
Query: 285 CAAYSHELPRYGVKVGLTNYAAAYSTG 365
+A S EL +YG N AAY TG
Sbjct: 60 SSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 41.1 bits (92), Expect = 0.024
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 495 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 602
LD+GL ++ G+RV+ A+KG VD G +P S FP
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect(2) = 6e-07
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 117 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 293
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 294 YSHELPRYGVKVGLTNYAAAYSTG 365
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
Score = 33.9 bits (74), Expect(2) = 6e-07
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = +3
Query: 477 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 602
G LD G + G R+ +KG D G+ VPH FP
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 8e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +3
Query: 108 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 203
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/88 (37%), Positives = 48/88 (54%)
Frame = +3
Query: 102 SYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 281
+Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD
Sbjct: 6 TYKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDET 58
Query: 282 VCAAYSHELPRYGVKVGLTNYAAAYSTG 365
+ +A S L +G N +AAY TG
Sbjct: 59 LVSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 37.1 bits (82), Expect = 0.39
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +3
Query: 495 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 602
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect(2) = 0.013
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 120 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 299
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 300 HELPRYGVKVGLTNYAAAYSTG 365
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
Score = 25.8 bits (54), Expect(2) = 0.013
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 477 GAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 602
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.51
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +3
Query: 120 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 299
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 300 HELPR 314
L +
Sbjct: 61 KTLKK 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,566,887
Number of Sequences: 1657284
Number of extensions: 13035983
Number of successful extensions: 33506
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 32181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33475
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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