Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6p03
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.0  
DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    23   6.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.8  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   6.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +1

Query: 457 CNLAHEVQNRLCARPSSRSCDSCSHRQHIACYM 555
           C  A   Q+R  +   +++CD C H +H   Y+
Sbjct: 228 CTEACFSQSRRASFKRAKTCDWCRHVRHAVSYV 260


>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 9/31 (29%), Positives = 14/31 (45%)
 Frame = +1

Query: 457 CNLAHEVQNRLCARPSSRSCDSCSHRQHIAC 549
           C    EV N   +    R+C++     H+AC
Sbjct: 58  CTDPREVYNECGSSCDDRTCENIRRGDHLAC 88


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 490  KADFGLREPNY-MTDLPSEYSRSRASVARRLYRHIRCDTGHSS 365
            K++F +   N  + DL SEY+    ++   LY       GH+S
Sbjct: 2367 KSNFSMTAINQELRDLLSEYASHLPAIIGALYHKFATALGHNS 2409


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -2

Query: 490  KADFGLREPNY-MTDLPSEYSRSRASVARRLYRHIRCDTGHSS 365
            K++F +   N  + DL SEY+    ++   LY       GH+S
Sbjct: 2368 KSNFSMTAINQELRDLLSEYASHLPAIIGALYHKFATALGHNS 2410


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 454 SCNLAHEVQNRLCARPSSR 510
           +CN  H + +  CARP++R
Sbjct: 434 ACNGPHRIGHISCARPAAR 452


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,389
Number of Sequences: 2352
Number of extensions: 12971
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)