Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6p03
         (686 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    29   3.1  
Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical pr...    28   5.4  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      28   7.2  

>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 439 LKEDPSCNLAHEVQNRLCARPSSRSCDSCSHRQHIACYMA 558
           +++ P+C+ A   QN  C + +  +CD    +Q+  C  A
Sbjct: 224 VQQQPACDCAPVQQNPCCQQQAQSTCDCAPVQQNPCCQQA 263


>Z49867-1|CAA90027.1|  312|Caenorhabditis elegans Hypothetical
           protein C33D3.3 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 475 VQNRLCARPSSRSCDSCSHRQHIAC 549
           VQN+L + P    C+ CSH   I C
Sbjct: 121 VQNKLPSTPPEHVCEKCSHCTAIIC 145


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
 Frame = +1

Query: 352  GTPC-GSNVQCRNECGDKVAARLMRDFWNILKE----DPSCNLAHEVQNRLCARPSSRSC 516
            G  C GS+ +  N C D     L    W+   +      SC    + ++R C+ P  +  
Sbjct: 1301 GAQCTGSDFEL-NPCFDPARCHLRDGGWSTWSDWTPCSASCGFGVQTRDRSCSSPEPKGG 1359

Query: 517  DSCSHRQH 540
             SCS   H
Sbjct: 1360 QSCSGLAH 1367


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
            C02B4.1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
 Frame = +1

Query: 352  GTPC-GSNVQCRNECGDKVAARLMRDFWNILKE----DPSCNLAHEVQNRLCARPSSRSC 516
            G  C GS+ +  N C D     L    W+   +      SC    + ++R C+ P  +  
Sbjct: 1301 GAQCTGSDFEL-NPCFDPARCHLRDGGWSTWSDWTPCSASCGFGVQTRDRSCSSPEPKGG 1359

Query: 517  DSCSHRQH 540
             SCS   H
Sbjct: 1360 QSCSGLAH 1367


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
 Frame = +1

Query: 352  GTPC-GSNVQCRNECGDKVAARLMRDFWNILKE----DPSCNLAHEVQNRLCARPSSRSC 516
            G  C GS+ +  N C D     L    W+   +      SC    + ++R C+ P  +  
Sbjct: 1301 GAQCTGSDFEL-NPCFDPARCHLRDGGWSTWSDWTPCSASCGFGVQTRDRSCSSPEPKGG 1359

Query: 517  DSCSHRQH 540
             SCS   H
Sbjct: 1360 QSCSGLAH 1367


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,171,440
Number of Sequences: 27780
Number of extensions: 309140
Number of successful extensions: 795
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)