Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o20
         (671 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ...    29   7.6  
AY060857-1|AAL28405.1|  276|Drosophila melanogaster GM03260p pro...    29   7.6  
AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA...    29   7.6  

>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
            homolog protein.
          Length = 1487

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +3

Query: 198  TISEGLTKAKSYNDNDLRTLNPREVRDVKDALKQIFSKRNIDPEQIKEINNYYDIETTVT 377
            ++S+G T + +   + +R ++ R   D+ D  + I S+RN+    I  I     +  T+ 
Sbjct: 1266 SVSDGATSSTADGQSGMREIHERCYTDLLDLCRTIASQRNVTMASIMNIQALKSMAETLP 1325

Query: 378  V 380
            +
Sbjct: 1326 I 1326


>AY060857-1|AAL28405.1|  276|Drosophila melanogaster GM03260p
           protein.
          Length = 276

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +3

Query: 198 TISEGLTKAKSYNDNDLRTLNPREVRDVKDALKQIFSKRNIDPEQIKEINNYYDIETTVT 377
           ++S+G T + +   + +R ++ R   D+ D  + I S+RN+    I  I     +  T+ 
Sbjct: 55  SVSDGATSSTADGQSGMREIHERCYTDLLDLCRTIASQRNVTMASIMNIQALKSMAETLP 114

Query: 378 V 380
           +
Sbjct: 115 I 115


>AE014297-1368|AAF54691.1| 1487|Drosophila melanogaster CG6920-PA
            protein.
          Length = 1487

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/61 (22%), Positives = 30/61 (49%)
 Frame = +3

Query: 198  TISEGLTKAKSYNDNDLRTLNPREVRDVKDALKQIFSKRNIDPEQIKEINNYYDIETTVT 377
            ++S+G T + +   + +R ++ R   D+ D  + I S+RN+    I  I     +  T+ 
Sbjct: 1266 SVSDGATSSTADGQSGMREIHERCYTDLLDLCRTIASQRNVTMASIMNIQALKSMAETLP 1325

Query: 378  V 380
            +
Sbjct: 1326 I 1326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,068,726
Number of Sequences: 53049
Number of extensions: 513381
Number of successful extensions: 1518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1509
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)