Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o19
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.    25   1.6  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   2.8  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.9  
AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione S-tran...    23   6.5  
AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione S-tran...    23   6.5  

>AJ302657-1|CAC35522.1|  115|Anopheles gambiae gSG6 protein protein.
          Length = 115

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 658 LRCSRFENLRGCRMHAVCPMRHFTSGHNTMNSLGFL 551
           L C+R    +G R   +C  RHF     T   L ++
Sbjct: 43  LDCTRVATFKGERFCTLCDTRHFCECKETREPLPYM 78


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -2

Query: 394 GHKAVAGASFIHGTGP 347
           GH  V G  F HGTGP
Sbjct: 181 GHVMVWGCFFWHGTGP 196


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 530  ECSRNQTEETETIHGIMSTSEMTH 601
            EC R  +  TE +HG++  + + H
Sbjct: 1032 ECPRFDSTRTELLHGVVPETLLEH 1055


>AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione
           S-transferase 3-8 protein.
          Length = 225

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 193 HKDADEHLNPTYCCLEDSM 137
           H D  EH+   Y  LEDS+
Sbjct: 129 HSDRIEHIRKAYRLLEDSL 147


>AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione
           S-transferase E7 protein.
          Length = 225

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 193 HKDADEHLNPTYCCLEDSM 137
           H D  EH+   Y  LEDS+
Sbjct: 129 HSDRIEHIRKAYRLLEDSL 147


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,719
Number of Sequences: 2352
Number of extensions: 14050
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)