Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o17
         (741 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003281-1|AAO25038.1|  268|Drosophila melanogaster LD01705p pro...   107   1e-23
AE014134-1788|AAF52879.1|  256|Drosophila melanogaster CG4912-PB...   107   1e-23
AE014134-1789|AAF52880.1|  229|Drosophila melanogaster CG4912-PA...    71   2e-12
AL031863-3|CAA21314.1|  222|Drosophila melanogaster EG:EG0003.7 ...    66   4e-11
AF172636-1|AAD46929.2|  244|Drosophila melanogaster LD24492p pro...    66   4e-11
AE013599-2364|AAF57941.2|  261|Drosophila melanogaster CG6341-PA...    66   4e-11
BT029931-1|ABM92805.1|  750|Drosophila melanogaster IP11737p pro...    30   3.8  
BT025916-1|ABG02160.1|  308|Drosophila melanogaster IP09541p pro...    30   3.8  
AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.      30   3.8  
AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA...    30   3.8  
X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein ...    29   5.0  
M31684-1|AAA28393.1|  782|Drosophila melanogaster protein ( D.me...    29   5.0  
AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p pro...    29   5.0  
AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA...    29   5.0  

>BT003281-1|AAO25038.1|  268|Drosophila melanogaster LD01705p
           protein.
          Length = 268

 Score =  107 bits (258), Expect = 1e-23
 Identities = 72/193 (37%), Positives = 94/193 (48%)
 Frame = +3

Query: 162 EKVWLDRNVYNDAEKAYYESLSKVQXXXXXXXXXXXXEVAKARQHIKNSLECMDSVATLA 341
           +K W D++ Y+ AEK +YE   KV             E+AKAR+HI+NSLE +D V TL 
Sbjct: 19  DKFWADKSRYDLAEKRFYEGPQKVTDRSHYSPLVS--EIAKAREHIQNSLEKIDGV-TLD 75

Query: 342 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAA 521
              N+EL+ ++  LE E+K+LK  +  L  L   L   V+ LE             +  A
Sbjct: 76  DGLNSELAKRLAQLEGEHKELKTQVSLLNEL---LTATVKRLETQLKLTNGVSKEPEVEA 132

Query: 522 ASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKPW 701
                                           RLAAY AKKAKK  +IAKSNIILDVKPW
Sbjct: 133 KKPEANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKPW 192

Query: 702 DDETDMAALEQAV 740
           DDETD+  +E  +
Sbjct: 193 DDETDLKVMETEI 205


>AE014134-1788|AAF52879.1|  256|Drosophila melanogaster CG4912-PB,
           isoform B protein.
          Length = 256

 Score =  107 bits (258), Expect = 1e-23
 Identities = 72/193 (37%), Positives = 94/193 (48%)
 Frame = +3

Query: 162 EKVWLDRNVYNDAEKAYYESLSKVQXXXXXXXXXXXXEVAKARQHIKNSLECMDSVATLA 341
           +K W D++ Y+ AEK +YE   KV             E+AKAR+HI+NSLE +D V TL 
Sbjct: 7   DKFWADKSRYDLAEKRFYEGPQKVTDRSHYSPLVS--EIAKAREHIQNSLEKIDGV-TLD 63

Query: 342 GVPNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAA 521
              N+EL+ ++  LE E+K+LK  +  L  L   L   V+ LE             +  A
Sbjct: 64  DGLNSELAKRLAQLEGEHKELKTQVSLLNEL---LTATVKRLETQLKLTNGVSKEPEVEA 120

Query: 522 ASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKPW 701
                                           RLAAY AKKAKK  +IAKSNIILDVKPW
Sbjct: 121 KKPEANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKPW 180

Query: 702 DDETDMAALEQAV 740
           DDETD+  +E  +
Sbjct: 181 DDETDLKVMETEI 193


>AE014134-1789|AAF52880.1|  229|Drosophila melanogaster CG4912-PA,
           isoform A protein.
          Length = 229

 Score = 70.5 bits (165), Expect = 2e-12
 Identities = 46/130 (35%), Positives = 60/130 (46%)
 Frame = +3

Query: 351 NTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVETLEXXXXXXXXXXXXEKPAAAST 530
           N+EL+ ++  LE E+K+LK  +  L  L+ +   R+ET              E   A   
Sbjct: 40  NSELAKRLAQLEGEHKELKTQVSLLNELLTATVKRLETQLKLTNGVSKEPEVE---AKKP 96

Query: 531 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLAAYNAKKAKKPVLIAKSNIILDVKPWDDE 710
                                        RLAAY AKKAKK  +IAKSNIILDVKPWDDE
Sbjct: 97  EANDDDDDVDLFGSDSEEEDGEAARIREERLAAYAAKKAKKVQIIAKSNIILDVKPWDDE 156

Query: 711 TDMAALEQAV 740
           TD+  +E  +
Sbjct: 157 TDLKVMETEI 166


>AL031863-3|CAA21314.1|  222|Drosophila melanogaster EG:EG0003.7
           protein.
          Length = 222

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +3

Query: 618 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAV 740
           R+AAY AKK+KKP LIAKS+++LDVKPWDDETDM  +E  V
Sbjct: 119 RVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNV 159


>AF172636-1|AAD46929.2|  244|Drosophila melanogaster LD24492p
           protein.
          Length = 244

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +3

Query: 618 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAV 740
           R+AAY AKK+KKP LIAKS+++LDVKPWDDETDM  +E  V
Sbjct: 141 RVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNV 181


>AE013599-2364|AAF57941.2|  261|Drosophila melanogaster CG6341-PA
           protein.
          Length = 261

 Score = 66.5 bits (155), Expect = 4e-11
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +3

Query: 618 RLAAYNAKKAKKPVLIAKSNIILDVKPWDDETDMAALEQAV 740
           R+AAY AKK+KKP LIAKS+++LDVKPWDDETDM  +E  V
Sbjct: 158 RVAAYAAKKSKKPALIAKSSVLLDVKPWDDETDMKEMENNV 198


>BT029931-1|ABM92805.1|  750|Drosophila melanogaster IP11737p
           protein.
          Length = 750

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 348 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 464
           PN E+  ++ ++  EN  L++ I  LR  +  L+ RVET
Sbjct: 203 PNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVET 241


>BT025916-1|ABG02160.1|  308|Drosophila melanogaster IP09541p
           protein.
          Length = 308

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 348 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 464
           PN E+  ++ ++  EN  L++ I  LR  +  L+ RVET
Sbjct: 203 PNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVET 241


>AJ849544-1|CAH61079.2| 1740|Drosophila melanogaster CAST protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +3

Query: 348 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 464
           PN E+  ++ ++  EN  L++ I  LR  V  L+ RVET
Sbjct: 203 PNLEMRQQMEAIYAENDHLQREISILRETVKDLECRVET 241


>AE013599-872|AAF58930.3| 1740|Drosophila melanogaster CG34146-PA
           protein.
          Length = 1740

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +3

Query: 348 PNTELSTKVISLENENKDLKKAIDDLRNLVISLQVRVET 464
           PN E+  ++ ++  EN  L++ I  LR  +  L+ RVET
Sbjct: 203 PNLEMQQQMEAIYAENDHLQREISILRETIKDLECRVET 241


>X51652-1|CAA35964.1|  782|Drosophila melanogaster Bic-D protein
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 300 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 431
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


>M31684-1|AAA28393.1|  782|Drosophila melanogaster protein (
           D.melanogaster cytoskeleton-like bicaudalD protein
           (BicD) mRNA, complete cds. ).
          Length = 782

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 300 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 431
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


>AY069452-1|AAL39597.1|  782|Drosophila melanogaster LD17129p
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 300 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 431
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


>AE014134-2851|AAF53616.1|  782|Drosophila melanogaster CG6605-PA
           protein.
          Length = 782

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = +3

Query: 300 KNSLECMDSVATLAGVPNTELSTKVISLENENKDLKKAIDDLRN 431
           K  +E  D++   +    T L+ ++  LENE K L+  ++ +RN
Sbjct: 90  KTGIEQEDALLNESAARETSLNLQIFDLENELKQLRHELERVRN 133


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,596,499
Number of Sequences: 53049
Number of extensions: 459855
Number of successful extensions: 1073
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1071
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)