Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6o16
(667 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces p... 43 5e-05
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 34 0.016
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.46
SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr... 28 1.4
SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces... 27 3.2
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.2
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 5.6
SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple ca... 26 5.6
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc... 26 5.6
SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subun... 26 5.6
SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4 |S... 26 5.6
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 25 7.4
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 25 7.4
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 25 7.4
SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyc... 25 9.8
SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27 family|Schi... 25 9.8
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 9.8
SPAC1142.06 |get3||GET complex ATPase subunit Get3 |Schizosaccha... 25 9.8
SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase |Sch... 25 9.8
SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 25 9.8
>SPBC1683.07 |mal1||alpha-glucosidase Mal1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 579
Score = 42.7 bits (96), Expect = 5e-05
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 417 VPTYEVLDKR-DTLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENS-TEPYTD 590
V Y+ +D R TL++ L + + +++++DL+ N+ H WF +S +S T P D
Sbjct: 73 VSDYKQIDSRYGTLEDLDRLMKALHERDMKLVMDLVLNHTSDQHEWFKESRSSKTNPKRD 132
Query: 591 YFIWTKEQPANWVSK 635
++ W +PA + K
Sbjct: 133 WYFW---KPARYNEK 144
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 34.3 bits (75), Expect = 0.016
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 501 RVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIWTKEQ 614
R I+D++ NY+F+ + V E E YTD+F KE+
Sbjct: 456 RAILDILNNYIFSCPLFLVTPEELEEQYTDFFKKLKEK 493
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 29.5 bits (63), Expect = 0.46
Identities = 15/58 (25%), Positives = 31/58 (53%)
Frame = -1
Query: 322 TRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTS 149
TR SSY + S + + ++ +P+S S+++ ++ +S + K SS+ S+S
Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSS 196
>SPBC29A10.07 |||nucleoporin Pom152|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1250
Score = 27.9 bits (59), Expect = 1.4
Identities = 13/59 (22%), Positives = 24/59 (40%)
Frame = -1
Query: 283 GPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCFLEGPG 107
G H + + P H A ++N F + + +S + +P+N L+ PG
Sbjct: 315 GKHFNTHIIDSTIPDDFHPPAVVLSSNPKDIVFYKGIDIQWARSSEIFVPINTLLKAPG 373
>SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 279
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 453 VCHVCRALRKSALGRTRPE 397
VC +C +L K+A+GR RP+
Sbjct: 102 VCGLCVSLLKNAVGRPRPD 120
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 26.2 bits (55), Expect = 4.2
Identities = 21/71 (29%), Positives = 27/71 (38%)
Frame = -1
Query: 325 PTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSS 146
PT PSS S T+TA S T T + T SS Y+S SS
Sbjct: 464 PTSAPSSVSSFTSSNSSY-TTTLTA-------SNTTVTFTGTGTGSATATSSSPYYSNSS 515
Query: 145 LVIPVNCFLEG 113
+++P G
Sbjct: 516 IIVPTTVSTSG 526
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 295 LGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVI 137
+G+G P + A+ P + S +T N+T S T ST + +
Sbjct: 150 VGNGNPSCVGIAVLAVLPQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTV 202
>SPBP19A11.07c ||SPBP4H10.02c|human down-regulated in multiple
cancers-1 homolog 2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 676
Score = 25.8 bits (54), Expect = 5.6
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)
Frame = +3
Query: 426 YEVLDKRDTLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFV----QSENSTEPYTDY 593
Y+ +D+ D I+ K I IRVI + + WF+ Q NS + Y+ +
Sbjct: 217 YDSIDELDFSVLNSIVSLDAKDIYIRVICSFVNTGFIDSTNWFLNSFNQRRNSLQLYSSW 276
Query: 594 FI 599
FI
Sbjct: 277 FI 278
>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 5.6
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 207 VLFWVAWLCMLAGAIAVI 260
VL W AWLC +G + +
Sbjct: 278 VLIWFAWLCFNSGTLLTV 295
>SPCC290.02 |rpc34||DNA-directed RNA polymerase III complex subunit
Rpc34|Schizosaccharomyces pombe|chr 3|||Manual
Length = 301
Score = 25.8 bits (54), Expect = 5.6
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +3
Query: 435 LDKRDTLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENSTE 578
L+ ++ + K + N +KI ++ DL+P+ T WF E E
Sbjct: 125 LESKNLVKSIKSVKNPTRKI--YMLYDLVPSTELTGGPWFTDQELDVE 170
>SPAC9G1.13c |||histone acetyltransferase complex subunit Swc4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 534 FTNHTWFVQSENSTEPYTDYFIWTKEQ 614
FT H W ++SE +E Y D W K++
Sbjct: 83 FTLHHWVLKSEVDSEAYED---WNKDE 106
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 25.4 bits (53), Expect = 7.4
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = -3
Query: 545 MVGEHVVRYQINNHSYSDLLNFVKQNFEFVQCVTFVEHF----VSRHLDEHAL 399
MV + Q NH+Y+DLL ++ + +HF ++R L++H+L
Sbjct: 1447 MVAIQHLNIQAVNHAYNDLLIEMEDYQSLQDSIENYDHFDAIALARRLEKHSL 1499
>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 377
Score = 25.4 bits (53), Expect = 7.4
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Frame = +1
Query: 304 TNSVPWSDW-TWSMPSNHKIYNRIW 375
T+S+P D W PS ++YN +W
Sbjct: 210 TSSIPKVDGKNWEYPSPQQMYNAMW 234
>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 343
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -3
Query: 332 VQSDQGTEFVPCPGFGRAALGC-AYNDCNSPGEHAQPGHPE 213
VQS QG P PG ++ YND NS G H+ E
Sbjct: 247 VQSVQGRPLAPIPGRRPLSISSDLYNDSNS-GSHSNDDSDE 286
>SPAC11G7.02 |pub1||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 767
Score = 25.0 bits (52), Expect = 9.8
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = -1
Query: 199 DQRKFTQKGSSAYFSTSSLVIPVNCFLEGPGSDAKAKILINQ 74
D+ +K F+T + IPVN F + GSD K I +
Sbjct: 681 DEWSNEKKSRLLQFTTGTSRIPVNGFKDLQGSDGPRKFTIEK 722
>SPAC19B12.01 ||SPAC4F10.21|TPR repeat protein, TTC27
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 135 GMTREEVLKYADDPFWVNLRWSLFVL 212
G+TREE+ YA+ + WS++ +
Sbjct: 324 GLTREEMAPYAERVLVYPVNWSVYTM 349
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.0 bits (52), Expect = 9.8
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = -1
Query: 268 ARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIP 134
A+ ++P ++ + NN +SD+ G+ FS+SS P
Sbjct: 82 AKRHKRMSPVAVKHEGISNNESSDENMNVNNGNLDSFSSSSAPPP 126
>SPAC1142.06 |get3||GET complex ATPase subunit Get3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/43 (25%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -3
Query: 623 ISRLFLGPD--EIISIGLSAVLTLYEPGMVGEHVVRYQINNHS 501
+++ F PD + + +S L+LYE + + + Y+I+ H+
Sbjct: 212 VNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSYEIDTHN 254
>SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 365
Score = 25.0 bits (52), Expect = 9.8
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 552 FVQSENSTEPYTDYFIWTKEQPANWVS 632
F + P+TD FI+ E+P +S
Sbjct: 165 FATDSDGLTPFTDVFIYNTEKPETLIS 191
>SPAC27F1.08 |pdt1||Nramp family manganese ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 521
Score = 25.0 bits (52), Expect = 9.8
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 141 TREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 263
T EE + + +L W++ ++ W WL + A + +IV
Sbjct: 473 TNEETGQLIRETHDYSLGWTMTIVTWAIWLFLTALNLLLIV 513
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,678,797
Number of Sequences: 5004
Number of extensions: 55863
Number of successful extensions: 198
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 303841898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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