Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o16
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    57   1e-10
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    49   5e-08
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    49   5e-08
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    47   2e-07
S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    26   0.37 
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   2.0  
DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    23   2.6  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    23   2.6  
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.6  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   4.6  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    22   6.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 57.2 bits (132), Expect = 1e-10
 Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
 Frame = +3

Query: 450 TLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIW--------T 605
           TL +F  L  + K +G++VI+D +PN+    H WF +S    +PY +Y++W        T
Sbjct: 98  TLADFDRLVRRAKSLGLKVILDFVPNHSSHEHPWFKKSVQRIKPYDEYYVWRDARIVNGT 157

Query: 606 KEQPANWVS 632
           ++ P NW+S
Sbjct: 158 RQPPNNWLS 166


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
 Frame = +3

Query: 450 TLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIW--------T 605
           T+ +   L +   + G+++I+D +PN+    H WF  S  + EPY +Y+IW         
Sbjct: 98  TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157

Query: 606 KEQPANWVSKINMPAFTRSE 665
           +  P NWV      A++  E
Sbjct: 158 RVPPTNWVGVFGGSAWSWRE 177


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 48.8 bits (111), Expect = 5e-08
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
 Frame = +3

Query: 450 TLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQSENSTEPYTDYFIW--------T 605
           T+ +   L +   + G+++I+D +PN+    H WF  S  + EPY +Y+IW         
Sbjct: 98  TISDLDNLVSAAHEKGLKIILDFVPNHTSDQHEWFQLSLKNIEPYNNYYIWHPGKIVNGK 157

Query: 606 KEQPANWVSKINMPAFTRSE 665
           +  P NWV      A++  E
Sbjct: 158 RVPPTNWVGVFGGSAWSWRE 177


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 46.8 bits (106), Expect = 2e-07
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
 Frame = +3

Query: 450 TLDEFKILFNKIKKIGIRVIVDLIPNYVFTNHTWFVQS-----ENSTEPYTDYFIW 602
           T+ + + L  + KK  ++VI+DL+PN+    H WF  S      N+T  Y DY+IW
Sbjct: 96  TIKDLEDLTAEAKKQNLKVILDLVPNHTSDQHKWFQMSINNTNNNNTNKYKDYYIW 151


>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
 Frame = +3

Query: 216 WVAWLCMLAGAIAVIVRAPKCGPPEPRTWY-ELGPLVGLDLVD 341
           WV   C     I VI++ P CGP     ++ +L PL  L   D
Sbjct: 9   WVGGFCHSIIQIPVIIQLPFCGPNVIDHYFRDLQPLFKLACTD 51


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = +1

Query: 205 SCCSGWPGCA-CSPGLLQSLYAHPSA 279
           S CS  P  A  S G L  +Y HPSA
Sbjct: 118 STCSSHPTAAFISYGTLFFIYVHPSA 143


>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 594 FIWTKEQPANWVSKINMPAFT 656
           F+W +  P   V  +++P FT
Sbjct: 190 FLWKEGDPVQVVKNLHLPRFT 210


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 594 FIWTKEQPANWVSKINMPAFT 656
           F+W +  P   V  +++P FT
Sbjct: 190 FLWKEGDPVQVVKNLHLPRFT 210


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 147 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 272
           E+  K  +D  W  +   L  LF W+  L +L G   +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 147 EEVLKYADDPFWVNLRWSLFVLF-WVAWLCMLAGAIAVIVRAP 272
           E+  K  +D  W  +   L  LF W+  L +L G   +I++AP
Sbjct: 502 EDSTKVKED--WKYVAMVLDRLFLWIFTLAVLVGTAGIILQAP 542


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +1

Query: 316 PWSDWTWSMPSN 351
           P+ DWTW+   N
Sbjct: 104 PYPDWTWAKNEN 115


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 207 VLFWVAWLCMLAGAIAVIVRAP 272
           +  WV  L   AG + +I +AP
Sbjct: 484 LFLWVFTLACTAGTLGIIFQAP 505


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,715
Number of Sequences: 438
Number of extensions: 4018
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)