Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o15
         (507 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.0  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   3.2  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   5.6  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   7.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   9.7  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   9.7  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     21   9.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 313 FSNTSPSKSSVLQNLPPDRNRDPLKRPGEKLSGLCPWNN 197
           F  +S + S+ L  L    N+D  K+  E+++  CP NN
Sbjct: 306 FETSSTTMSNALYELA--LNQDVQKKLREEINTFCPKNN 342


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/19 (42%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +2

Query: 167 IEFFDYDEER-IIPWTQPT 220
           +EFF +DE+R ++ W   T
Sbjct: 135 VEFFPFDEQRCVLKWASWT 153


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = -3

Query: 409 FCIPVVFILYLFA 371
           +CIP++ I+Y ++
Sbjct: 220 YCIPMILIIYYYS 232


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 87  LKHIIIYIPSYMYL 46
           +KH ++Y+  Y YL
Sbjct: 528 IKHDMVYLQKYFYL 541


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -1

Query: 87  LKHIIIYIPSYMYL 46
           +KH ++Y+  Y YL
Sbjct: 528 IKHDMVYLQKYFYL 541


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -3

Query: 313  FSNTSPSKSSVLQNLPP 263
            F ++SP+ + +LQ+ PP
Sbjct: 1254 FKDSSPATALMLQHAPP 1270


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -3

Query: 310 SNTSPSKSSVLQNLPPDRNRDPLKRP-GEKLSGLCPWNNSLFVVIEEFDRVGLFR 149
           + T  +K + L+  P   ++  +    G+  S LCP   S  + +   +RVG  R
Sbjct: 348 TETLNTKCNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVSGINRVGSTR 402


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 273 IYHRIGIATH*KDPARNSVGCVHG 202
           +Y RIG+       A N  G VHG
Sbjct: 224 LYIRIGLRIQSDSLAENVEGYVHG 247


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 197 IIPWTQPTEFLAG 235
           I PWT+  EF+ G
Sbjct: 395 INPWTKKLEFVVG 407


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 197 IIPWTQPTEFLAG 235
           I PWT+  EF+ G
Sbjct: 101 INPWTKKLEFVVG 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,182
Number of Sequences: 438
Number of extensions: 2469
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)