Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6o12
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL034393-3|CAA22319.1| 348|Caenorhabditis elegans Hypothetical ... 113 2e-25
Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical pr... 29 4.3
U11245-1|AAA96833.1| 198|Caenorhabditis elegans cysteine protea... 29 4.3
L22447-1|AAB00354.1| 133|Caenorhabditis elegans cysteine protea... 29 4.3
AC024830-7|AAV34782.1| 580|Caenorhabditis elegans Hypothetical ... 28 5.7
AC024830-6|AAF59601.3| 603|Caenorhabditis elegans Hypothetical ... 28 5.7
U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical pr... 28 7.6
AF016422-7|AAW88391.1| 296|Caenorhabditis elegans Serpentine re... 28 7.6
>AL034393-3|CAA22319.1| 348|Caenorhabditis elegans Hypothetical
protein Y18D10A.3 protein.
Length = 348
Score = 113 bits (271), Expect = 2e-25
Identities = 57/126 (45%), Positives = 80/126 (63%)
Frame = +2
Query: 335 YLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKVFPPSTHSSALIVCGPGNNGG 514
++ Q AA +D+ LFT+Y F V+QLMELAGL+ A AIA +P S + ++CGPGNNGG
Sbjct: 125 FIGQKLAAQIDEQLFTKYGFKVEQLMELAGLAAAQAIAAHYPKS---NVAVLCGPGNNGG 181
Query: 515 DGLVAARHMQLFGYNVSVHYPKRTPKPLYENLLEQCIRFNVNIIDKLPDPKDLNNEYKVL 694
DG V ARH+Q FG+ S+ YPK + L ++L+ QC ++ I LP + ++
Sbjct: 182 DGFVCARHLQQFGFTPSIVYPKESRNELMKSLVVQCETSSIPITATLPTNL---QAFPLI 238
Query: 695 XDALFG 712
DALFG
Sbjct: 239 VDALFG 244
>Z75953-1|CAB00098.1| 400|Caenorhabditis elegans Hypothetical
protein F57F5.1 protein.
Length = 400
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 428 SVASAIAKVFPPSTHSSALIVCGPGNNGGDGLVAARHMQLFGYNVSVHYPKRT 586
S A I + ++ +VCG G NGG + A RH GY Y +T
Sbjct: 191 SNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKGYVTGGSYQDKT 243
>U11245-1|AAA96833.1| 198|Caenorhabditis elegans cysteine protease
protein.
Length = 198
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 428 SVASAIAKVFPPSTHSSALIVCGPGNNGGDGLVAARHMQLFGYNVSVHYPKRT 586
S A I + ++ +VCG G NGG + A RH GY Y +T
Sbjct: 19 SNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKGYVTGGSYQDKT 71
>L22447-1|AAB00354.1| 133|Caenorhabditis elegans cysteine protease
protein.
Length = 133
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +2
Query: 428 SVASAIAKVFPPSTHSSALIVCGPGNNGGDGLVAARHMQLFGYNVSVHYPKRT 586
S A I + ++ +VCG G NGG + A RH GY Y +T
Sbjct: 19 SNAKTILSISADDINACCGMVCGNGCNGGYPIEAWRHYVKKGYVTGGSYQDKT 71
>AC024830-7|AAV34782.1| 580|Caenorhabditis elegans Hypothetical
protein Y55F3BR.8b protein.
Length = 580
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +2
Query: 275 KLYNIGTMTSSMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKV 454
+LY G ++ + N + YLN + D L KF ++ + L+ SA +
Sbjct: 170 RLYGTGADDVTLRKINILDSYLNTPDKGNSDTPLHFASKFGKIGVVRV--LTENSATDRT 227
Query: 455 FPPSTHSSALIVCGPGNNGGDGLVAAR--HMQLFGYNVSVH 571
+ SAL G G D + R H+ + G+ V +H
Sbjct: 228 LLNKSGKSALDCAGERYTGEDKDMVQRDIHLAIEGFYVFLH 268
>AC024830-6|AAF59601.3| 603|Caenorhabditis elegans Hypothetical
protein Y55F3BR.8a protein.
Length = 603
Score = 28.3 bits (60), Expect = 5.7
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Frame = +2
Query: 275 KLYNIGTMTSSMNQCNTVTRYLNQSEAAALDQDLFTEYKFSVDQLMELAGLSVASAIAKV 454
+LY G ++ + N + YLN + D L KF ++ + L+ SA +
Sbjct: 193 RLYGTGADDVTLRKINILDSYLNTPDKGNSDTPLHFASKFGKIGVVRV--LTENSATDRT 250
Query: 455 FPPSTHSSALIVCGPGNNGGDGLVAAR--HMQLFGYNVSVH 571
+ SAL G G D + R H+ + G+ V +H
Sbjct: 251 LLNKSGKSALDCAGERYTGEDKDMVQRDIHLAIEGFYVFLH 291
>U28928-9|AAN63431.1| 471|Caenorhabditis elegans Hypothetical
protein C44B7.10 protein.
Length = 471
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 551 GYNVSVHYPKRTPKPLYENLLEQCIRFNVNII 646
G NV VH TP PL ++L E + N+N I
Sbjct: 53 GDNVFVHGIAATPTPLLQSLSEHAVANNLNKI 84
>AF016422-7|AAW88391.1| 296|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 59 protein.
Length = 296
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 226 NVIVQVVRECSNIACSKTV*HRNYDEQYES-MQHC 327
++++ + EC+N CS + NY + YE MQ C
Sbjct: 148 DMVIDIPIECNNFGCSVNSCYHNYWKWYEQIMQLC 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,899,819
Number of Sequences: 27780
Number of extensions: 350348
Number of successful extensions: 878
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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