Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o12
         (712 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   6.6  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   8.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   8.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   8.7  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 599 YENLLEQCIRFNVNIIDKLPDP 664
           Y N   + + +N+N I+++P P
Sbjct: 318 YNNYNNKKLYYNINYIEQIPVP 339


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 632 NVNIIDKLPDPKDLNNEYKVLXD 700
           N+N+ + L   + LNN +K L D
Sbjct: 31  NINVDEILHSDRLLNNYFKCLMD 53


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 632 NVNIIDKLPDPKDLNNEYKVLXD 700
           N+N+ + L   + LNN +K L D
Sbjct: 31  NINVDEILHSDRLLNNYFKCLMD 53


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 632 NVNIIDKLPDPKDLNNEYKVLXD 700
           N+N+ + L   + LNN +K L D
Sbjct: 31  NINVDEILHSDRLLNNYFKCLMD 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,591
Number of Sequences: 438
Number of extensions: 5090
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)