Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6o07
(701 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1 fa... 223 5e-58
BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1 fa... 221 1e-57
AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant ... 221 1e-57
AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein. 221 2e-57
BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein pr... 210 5e-54
AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein. 208 1e-53
AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein. 208 1e-53
BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1 fa... 133 5e-31
BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1 fa... 133 5e-31
AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein. 133 5e-31
AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein. 133 5e-31
AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens ... 133 5e-31
AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein pr... 132 1e-30
AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens ... 132 1e-30
BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1, ... 67 5e-11
AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protei... 67 5e-11
AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein. 67 5e-11
AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1 p... 67 5e-11
AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein. 47 7e-05
AF132596-1|AAD22110.1| 436|Homo sapiens origin recognition comp... 33 0.99
AF047598-1|AAC80282.1| 436|Homo sapiens origin recognition comp... 33 0.99
AF022108-1|AAC01957.1| 436|Homo sapiens putative replication in... 33 0.99
BC014847-1|AAH14847.1| 436|Homo sapiens origin recognition comp... 32 2.3
AY600302-1|AAS94326.1| 436|Homo sapiens origin recognition comp... 32 2.3
AC019226-1|AAY24232.1| 145|Homo sapiens unknown protein. 32 2.3
AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein. 31 5.3
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 30 7.0
AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein. 30 9.2
>BC031024-1|AAH31024.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 223 bits (545), Expect = 5e-58
Identities = 99/140 (70%), Positives = 115/140 (82%)
Frame = +1
Query: 280 RYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 459
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y +VDIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMVDIRELIEVDD 62
Query: 460 AMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 639
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 640 LVDLLQNWNFRICVVFLVDS 699
LV L+ W FR+C VFLVDS
Sbjct: 123 LVQQLEQWEFRVCGVFLVDS 142
>BC008416-1|AAH08416.1| 284|Homo sapiens ATP binding domain 1
family, member C protein.
Length = 284
Score = 221 bits (541), Expect = 1e-57
Identities = 98/140 (70%), Positives = 114/140 (81%)
Frame = +1
Query: 280 RYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 459
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 460 AMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 639
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 640 LVDLLQNWNFRICVVFLVDS 699
LV L+ W FR+C VFLVDS
Sbjct: 123 LVQQLEQWEFRVCGVFLVDS 142
>AK223209-1|BAD96929.1| 284|Homo sapiens protein x 0004 variant
protein.
Length = 284
Score = 221 bits (541), Expect = 1e-57
Identities = 98/140 (70%), Positives = 114/140 (81%)
Frame = +1
Query: 280 RYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 459
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 460 AMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 639
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 640 LVDLLQNWNFRICVVFLVDS 699
LV L+ W FR+C VFLVDS
Sbjct: 123 LVQQLEQWEFRVCGVFLVDS 142
>AY359078-1|AAQ89437.1| 284|Homo sapiens PRYA1876 protein.
Length = 284
Score = 221 bits (540), Expect = 2e-57
Identities = 98/140 (70%), Positives = 113/140 (80%)
Frame = +1
Query: 280 RYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 459
RYAQL++GPAGSGKSTYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAQLVMGPAGSGKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 460 AMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 639
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM+
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKH 122
Query: 640 LVDLLQNWNFRICVVFLVDS 699
LV L+ W FR+C VFLVDS
Sbjct: 123 LVQQLEQWEFRVCGVFLVDS 142
>BX537973-1|CAD97937.1| 314|Homo sapiens hypothetical protein
protein.
Length = 314
Score = 210 bits (512), Expect = 5e-54
Identities = 98/150 (65%), Positives = 114/150 (76%), Gaps = 10/150 (6%)
Frame = +1
Query: 280 RYAQLIVGPAGSGK----------STYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLV 429
RYAQL++GPAGSGK STYC+T+V+H R V VVNLDPAAEHF+Y +
Sbjct: 23 RYAQLVMGPAGSGKVRICGDKERKSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMA 82
Query: 430 DIRELIHLDDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIE 609
DIRELI +DD MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIE
Sbjct: 83 DIRELIEVDDVMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIE 142
Query: 610 LYTHLPVMRRLVDLLQNWNFRICVVFLVDS 699
LYTHLPVM++LV L+ W FR+C VFLVDS
Sbjct: 143 LYTHLPVMKQLVQQLEQWEFRVCGVFLVDS 172
>AY364262-1|AAQ76821.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 208 bits (509), Expect = 1e-53
Identities = 92/140 (65%), Positives = 110/140 (78%)
Frame = +1
Query: 280 RYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 459
RYA ++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 460 AMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 639
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 640 LVDLLQNWNFRICVVFLVDS 699
LV L+ W FR+C VFLVDS
Sbjct: 123 LVQQLEQWEFRVCGVFLVDS 142
>AF117229-1|AAF17210.1| 284|Homo sapiens protein x 0004 protein.
Length = 284
Score = 208 bits (509), Expect = 1e-53
Identities = 92/140 (65%), Positives = 110/140 (78%)
Frame = +1
Query: 280 RYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDD 459
RYA ++GPA + +STYC+T+V+H R V VVNLDPAAEHF+Y + DIRELI +DD
Sbjct: 3 RYAHCVMGPAHAKRSTYCATMVQHCEALNRSVQVVNLDPAAEHFNYSVMADIRELIEVDD 62
Query: 460 AMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVMRR 639
MED+ L+FGPNGGLVFC+E N DWLE LG V+DDYILFDCPGQIELYTHLPVM++
Sbjct: 63 VMEDDSLRFGPNGGLVFCMEYFANNFDWLENCLGHVEDDYILFDCPGQIELYTHLPVMKQ 122
Query: 640 LVDLLQNWNFRICVVFLVDS 699
LV L+ W FR+C VFLVDS
Sbjct: 123 LVQQLEQWEFRVCGVFLVDS 142
>BC008634-1|AAH08634.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 133 bits (322), Expect = 5e-31
Identities = 65/142 (45%), Positives = 86/142 (60%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>BC007815-1|AAH07815.1| 310|Homo sapiens ATP binding domain 1
family, member B protein.
Length = 310
Score = 133 bits (322), Expect = 5e-31
Identities = 65/142 (45%), Positives = 86/142 (60%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>AY358864-1|AAQ89223.1| 310|Homo sapiens AGAA5828 protein.
Length = 310
Score = 133 bits (322), Expect = 5e-31
Identities = 65/142 (45%), Positives = 86/142 (60%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>AL034380-4|CAB92117.1| 310|Homo sapiens novel protein protein.
Length = 310
Score = 133 bits (322), Expect = 5e-31
Identities = 65/142 (45%), Positives = 86/142 (60%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>AK022535-1|BAB14084.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to
HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III.
).
Length = 310
Score = 133 bits (322), Expect = 5e-31
Identities = 65/142 (45%), Positives = 86/142 (60%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q ++GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>AY364261-1|AAQ76820.1| 310|Homo sapiens hypothetical protein
protein.
Length = 310
Score = 132 bits (319), Expect = 1e-30
Identities = 65/142 (45%), Positives = 85/142 (59%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q + GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>AK001211-1|BAA91556.1| 310|Homo sapiens protein ( Homo sapiens
cDNA FLJ10349 fis, clone NT2RM2001100. ).
Length = 310
Score = 132 bits (319), Expect = 1e-30
Identities = 65/142 (45%), Positives = 85/142 (59%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHL 453
T + Q + GP GSGK+TYC + + R V VVNLDPA E YE VD+ EL+ L
Sbjct: 7 TTAFGQAVTGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYECAVDVGELVGL 66
Query: 454 DDAMEDEELQFGPNGGLVFCIETLLENSDWLEEQLGDVDDDYILFDCPGQIELYTHLPVM 633
D M+ L+ GPNGGL++C+E L N DWL +L + Y LFDCPGQ+EL TH +
Sbjct: 67 GDVMD--ALRLGPNGGLLYCMEYLEANLDWLRAKLDPLRGHYFLFDCPGQVELCTHHGAL 124
Query: 634 RRLVDLLQNWNFRICVVFLVDS 699
R + + W+ R+ V LVDS
Sbjct: 125 RSIFSQMAQWDLRLTAVHLVDS 146
>BC007451-1|AAH07451.1| 374|Homo sapiens XPA binding protein 1,
GTPase protein.
Length = 374
Score = 67.3 bits (157), Expect = 5e-11
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 292 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 471
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 472 EELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 645
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 83 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 140
Query: 646 DLLQNWNFRICVVFLVDS 699
+ L + +F V++++D+
Sbjct: 141 EALAS-SFPTVVIYVMDT 157
>AJ010842-1|CAA09376.1| 358|Homo sapiens ATP(GTP)-binding protein
protein.
Length = 358
Score = 67.3 bits (157), Expect = 5e-11
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 292 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 471
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 7 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 66
Query: 472 EELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 645
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 67 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 124
Query: 646 DLLQNWNFRICVVFLVDS 699
+ L + +F V++++D+
Sbjct: 125 EALAS-SFPTVVIYVMDT 141
>AC074091-4|AAX93201.1| 374|Homo sapiens unknown protein.
Length = 374
Score = 67.3 bits (157), Expect = 5e-11
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 292 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 471
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 472 EELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 645
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 83 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 140
Query: 646 DLLQNWNFRICVVFLVDS 699
+ L + +F V++++D+
Sbjct: 141 EALAS-SFPTVVIYVMDT 157
>AB044661-1|BAB17612.1| 374|Homo sapiens XPA binding protein 1
protein.
Length = 374
Score = 67.3 bits (157), Expect = 5e-11
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Frame = +1
Query: 292 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIRELIHLDDAMED 471
L++G AGSGK+T+ + H V+NLDPA + +DIR+ + + M+
Sbjct: 23 LVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQ 82
Query: 472 EELQFGPNGGLVFCIETLLENSDWLEEQLGDVDD--DYILFDCPGQIELYTHLPVMRRLV 645
L GPNGG+V + D + + + + Y+L D PGQIE++T +
Sbjct: 83 YGL--GPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIIT 140
Query: 646 DLLQNWNFRICVVFLVDS 699
+ L + +F V++++D+
Sbjct: 141 EALAS-SFPTVVIYVMDT 157
>AL034380-3|CAI21619.1| 172|Homo sapiens novel protein protein.
Length = 172
Score = 46.8 bits (106), Expect = 7e-05
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 274 TMRYAQLIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYE 420
T + Q ++GP GSGK+TYC + + R V VVNLDPA E Y+
Sbjct: 7 TTAFGQAVIGPPGSGKTTYCLGMSEFLRALGRRVAVVNLDPANEGLPYD 55
>AF132596-1|AAD22110.1| 436|Homo sapiens origin recognition complex
subunit 4 protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.99
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 HVLDLNKKTMRYAQ----LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEH 408
H+ +L K+T + + LI+GP GSGK+ S +K M+ + + V V+L+ +
Sbjct: 46 HLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQI 105
Query: 409 FDYEPLVDIRELIHLDDAMEDEEL-QFGPNGGLVFCIETL 525
D L +I ++L++ + D+ F N L F +E L
Sbjct: 106 NDKIALKEITRQLNLENVVGDKVFGSFAEN--LSFLLEAL 143
>AF047598-1|AAC80282.1| 436|Homo sapiens origin recognition complex
subunit 4 protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.99
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 HVLDLNKKTMRYAQ----LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEH 408
H+ +L K+T + + LI+GP GSGK+ S +K M+ + + V V+L+ +
Sbjct: 46 HLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQI 105
Query: 409 FDYEPLVDIRELIHLDDAMEDEEL-QFGPNGGLVFCIETL 525
D L +I ++L++ + D+ F N L F +E L
Sbjct: 106 NDKIALKEITRQLNLENVVGDKVFGSFAEN--LSFLLEAL 143
>AF022108-1|AAC01957.1| 436|Homo sapiens putative replication
initiator origin recognition complex subunit Orc4Lp
protein.
Length = 436
Score = 33.1 bits (72), Expect = 0.99
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 HVLDLNKKTMRYAQ----LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEH 408
H+ +L K+T + + LI+GP GSGK+ S +K M+ + + V V+L+ +
Sbjct: 46 HLSELLKRTALHGESNSVLIIGPRGSGKTMLISHALKELMEIEEVSENVLQVHLNGLLQI 105
Query: 409 FDYEPLVDIRELIHLDDAMEDEEL-QFGPNGGLVFCIETL 525
D L +I ++L++ + D+ F N L F +E L
Sbjct: 106 NDKIALKEITRQLNLENVVGDKVFGSFAEN--LSFLLEAL 143
>BC014847-1|AAH14847.1| 436|Homo sapiens origin recognition
complex, subunit 4-like (yeast) protein.
Length = 436
Score = 31.9 bits (69), Expect = 2.3
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 HVLDLNKKTMRYAQ----LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEH 408
H+ +L K+T + + LI+GP GSGK+ + +K M+ + + V V+L+ +
Sbjct: 46 HLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQI 105
Query: 409 FDYEPLVDIRELIHLDDAMEDEEL-QFGPNGGLVFCIETL 525
D L +I ++L++ + D+ F N L F +E L
Sbjct: 106 NDKIALKEITRQLNLENVVGDKVFGSFAEN--LSFLLEAL 143
>AY600302-1|AAS94326.1| 436|Homo sapiens origin recognition
complex, subunit 4-like (yeast) protein.
Length = 436
Score = 31.9 bits (69), Expect = 2.3
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 HVLDLNKKTMRYAQ----LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEH 408
H+ +L K+T + + LI+GP GSGK+ + +K M+ + + V V+L+ +
Sbjct: 46 HLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQI 105
Query: 409 FDYEPLVDIRELIHLDDAMEDEEL-QFGPNGGLVFCIETL 525
D L +I ++L++ + D+ F N L F +E L
Sbjct: 106 NDKIALKEITRQLNLENVVGDKVFGSFAEN--LSFLLEAL 143
>AC019226-1|AAY24232.1| 145|Homo sapiens unknown protein.
Length = 145
Score = 31.9 bits (69), Expect = 2.3
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Frame = +1
Query: 250 HVLDLNKKTMRYAQ----LIVGPAGSGKSTYCSTIVKHAMDSKRI---VDVVNLDPAAEH 408
H+ +L K+T + + LI+GP GSGK+ + +K M+ + + V V+L+ +
Sbjct: 46 HLSELLKRTALHGESNSVLIIGPRGSGKTMLINHALKELMEIEEVSENVLQVHLNGLLQI 105
Query: 409 FDYEPLVDIRELIHLDDAMEDEEL-QFGPNGGLVFCIETL 525
D L +I ++L++ + D+ F N L F +E L
Sbjct: 106 NDKIALKEITRQLNLENVVGDKVFGSFAEN--LSFLLEAL 143
>AB037831-1|BAA92648.2| 4355|Homo sapiens KIAA1410 protein protein.
Length = 4355
Score = 30.7 bits (66), Expect = 5.3
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +1
Query: 247 THVLDLNKKTM-RYAQLIVGPAGSGKSTYCSTIVKHAMDS 363
T + L + T+ R+ ++VGP GSGKST C ++ AM S
Sbjct: 1868 TKCIQLYETTVVRHGLMLVGPTGSGKST-CYRVLAAAMTS 1906
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 30.3 bits (65), Expect = 7.0
Identities = 17/63 (26%), Positives = 27/63 (42%)
Frame = -2
Query: 556 VAPLTSQNSLRGSLYKTLDHHLVQIAIPHLP*HHQGVLVL*CLRVAHSQSVQLLGPSLLH 377
+ P+ L LDHHLVQ+ H P H GV + + +++ P L
Sbjct: 796 LGPIWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFVKSFINSIRRAINKYPPINLK 855
Query: 376 LQC 368
++C
Sbjct: 856 IKC 858
>AB040936-1|BAA96027.2| 4464|Homo sapiens KIAA1503 protein protein.
Length = 4464
Score = 29.9 bits (64), Expect = 9.2
Identities = 13/49 (26%), Positives = 28/49 (57%)
Frame = +1
Query: 292 LIVGPAGSGKSTYCSTIVKHAMDSKRIVDVVNLDPAAEHFDYEPLVDIR 438
L+VGP G+GK++ ++++ S+ V VVN+ + + +++ R
Sbjct: 2450 LLVGPVGTGKTSIAQSVLQSLPSSQWSVLVVNMSAQTTSNNVQSIIESR 2498
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,551,967
Number of Sequences: 237096
Number of extensions: 1937445
Number of successful extensions: 4699
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4683
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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