Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6o02
         (514 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3002|AAM68406.1|  252|Drosophila melanogaster CG13867-P...   105   3e-23
AY071108-1|AAL48730.1|  252|Drosophila melanogaster RE16440p pro...   105   5e-23
AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-P...    28   8.5  

>AE013599-3002|AAM68406.1|  252|Drosophila melanogaster CG13867-PA
           protein.
          Length = 252

 Score =  105 bits (253), Expect = 3e-23
 Identities = 56/124 (45%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
 Frame = +1

Query: 121 AIITSSLSHKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVG 300
           A +T+  + K + Q+ KVVSHV +++SK RE+WE ES   TG+Q T ++ADT  LV AVG
Sbjct: 129 ANLTNDAAMKQVTQYNKVVSHVLDMVSKAREEWEIESSSRTGIQQTSSMADTQLLVAAVG 188

Query: 301 TGKGLR-----PGMANMVGQXXXXXXXXXXXXXQLGPAPSTLPKAPSAIKTNIKAANQIH 465
            GKGL+     PG   MV                 G     L KAPSA+KTNIK+ANQ+H
Sbjct: 189 MGKGLKLTNYGPGPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTNIKSANQVH 248

Query: 466 PYQR 477
           P+ R
Sbjct: 249 PFSR 252


>AY071108-1|AAL48730.1|  252|Drosophila melanogaster RE16440p
           protein.
          Length = 252

 Score =  105 bits (251), Expect = 5e-23
 Identities = 56/124 (45%), Positives = 73/124 (58%), Gaps = 5/124 (4%)
 Frame = +1

Query: 121 AIITSSLSHKHIAQFTKVVSHVWEIISKGREDWEGESMRSTGMQPTHNIADTHALVTAVG 300
           A +T+  + K + Q+ KVVSHV +++SK RE+WE ES   TG+Q T ++ADT  LV AVG
Sbjct: 129 ANLTNDAAMKQVTQYNKVVSHVPDMVSKAREEWEIESSSRTGIQQTSSMADTQLLVAAVG 188

Query: 301 TGKGLR-----PGMANMVGQXXXXXXXXXXXXXQLGPAPSTLPKAPSAIKTNIKAANQIH 465
            GKGL+     PG   MV                 G     L KAPSA+KTNIK+ANQ+H
Sbjct: 189 MGKGLKLTNYGPGPGMMVPPSIRAPSPMGGPAMSPGNVQQQLGKAPSAVKTNIKSANQVH 248

Query: 466 PYQR 477
           P+ R
Sbjct: 249 PFSR 252


>AE014297-1204|AAF54559.2| 2762|Drosophila melanogaster CG14692-PA
           protein.
          Length = 2762

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +1

Query: 100 QVEYLRHAIITSSLSHK-HIAQFTKVVSHVWEIISKGREDWE 222
           ++EY +++    SL  K H+A  TKV      ++S  R+D E
Sbjct: 123 RIEYSKYSSYEKSLKDKEHLAPATKVTCECGRVLSANRKDVE 164


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,236,981
Number of Sequences: 53049
Number of extensions: 346300
Number of successful extensions: 977
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)