Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n21
         (122 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    21   3.9  
AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.         21   6.8  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 107  VCMPLHACHLVLFSQITSSS 48
            VC    A H+ L S +TSS+
Sbjct: 1453 VCFVTKAVHIELVSNLTSSA 1472


>AF063021-1|AAC16246.1|   69|Anopheles gambiae unknown protein.
          Length = 69

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -2

Query: 109 LCVCLCMHVT 80
           LCVC+C+ V+
Sbjct: 58  LCVCVCVDVS 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,564
Number of Sequences: 2352
Number of extensions: 1110
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 563,979
effective HSP length: 21
effective length of database: 514,587
effective search space used:  9777153
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)