Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n19
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   2.0  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               23   3.6  
AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex det...    23   3.6  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    23   3.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   3.6  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    22   4.7  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    22   4.7  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   4.7  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   4.7  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   4.7  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   4.7  

>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 34  IHLGNHQSVLGHS 72
           +H  NH ++LGHS
Sbjct: 281 VHHANHHAILGHS 293


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = -1

Query: 261 YIFFWILLYTIIFMH 217
           Y FF+IL+ T+IF++
Sbjct: 5   YHFFFILVITLIFLY 19


>AY569716-1|AAS86669.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 638 NVKTLYYNFINV 603
           N K LYYN IN+
Sbjct: 330 NYKPLYYNIINI 341


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 638 NVKTLYYNFINV 603
           N K LYYN IN+
Sbjct: 348 NYKKLYYNIINI 359


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 638 NVKTLYYNFINV 603
           N K LYYN IN+
Sbjct: 350 NCKKLYYNIINI 361


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 638 NVKTLYYNFINV 603
           N K LYYN IN+
Sbjct: 319 NSKKLYYNIINI 330


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 638 NVKTLYYNFINV 603
           N K LYYN IN+
Sbjct: 330 NSKKLYYNIINI 341


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = -1

Query: 39  MYSSGDRTLIIWC 1
           +Y + D+T ++WC
Sbjct: 209 IYHNDDKTFLVWC 221


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 49  HQSVLGHSEPIPVHTQNFE*VKQELMHLVVLLGKRGVI 162
           HQ + G      ++++NF   K+ LM    + GK+  I
Sbjct: 34  HQEMQGKQNSASLNSENFGIFKRALMGFQGVRGKKNSI 71


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 49  HQSVLGHSEPIPVHTQNFE*VKQELMHLVVLLGKRGVI 162
           HQ + G      ++++NF   K+ LM    + GK+  I
Sbjct: 34  HQEMQGKQNSASLNSENFGIFKRALMGFQGVRGKKNSI 71


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 49  HQSVLGHSEPIPVHTQNFE*VKQELMHLVVLLGKRGVI 162
           HQ + G      ++++NF   K+ LM    + GK+  I
Sbjct: 34  HQEMQGKQNSASLNSENFGIFKRALMGFQGVRGKKNSI 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,919
Number of Sequences: 438
Number of extensions: 3278
Number of successful extensions: 19
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)