Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6n18
         (704 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL161712-4|CAC35907.1|  175|Caenorhabditis elegans Hypothetical ...    40   0.002
U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical pr...    31   0.61 
Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.      29   4.3  
U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein...    29   4.3  
U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein...    29   4.3  
U23177-9|AAA64327.1|  217|Caenorhabditis elegans Hypothetical pr...    28   5.7  

>AL161712-4|CAC35907.1|  175|Caenorhabditis elegans Hypothetical
           protein Y66D12A.7 protein.
          Length = 175

 Score = 39.9 bits (89), Expect = 0.002
 Identities = 20/76 (26%), Positives = 38/76 (50%)
 Frame = +3

Query: 24  LEDSITFANKILHINTDNIEPLYXXXXXXXXXXRPDKITQGNCQKDILKNATVKEDDYFV 203
           L  SI  A ++  ++ + +EP++            D        +++ +NA+++ DD+FV
Sbjct: 73  LRSSIRVAKRLELVDVEGVEPMHTVWEDQECPTFEDVEEDPLPIEEVFRNASLRFDDFFV 132

Query: 204 APTGNIPLLEIENKEL 251
            P GN+PL   E  +L
Sbjct: 133 TPPGNLPLESKERFDL 148


>U39994-1|AAB37019.1|  326|Caenorhabditis elegans Hypothetical
           protein C48C5.3 protein.
          Length = 326

 Score = 31.5 bits (68), Expect = 0.61
 Identities = 15/55 (27%), Positives = 30/55 (54%)
 Frame = -1

Query: 302 FKTLRISVFIFVGCLQRKFFVFYFEQWYIPSRSHKVIILFHCSIF*YVLLTISLC 138
           FK + ++VF++ GC    F  +Y E +       +++IL +  +  Y++ T+S C
Sbjct: 143 FKGVSLAVFVWFGCFVFVFICWYLECFTCEDDCRQLMILPN-KVVMYIVFTVSAC 196


>Z79605-7|CAB01908.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 STEILTHNLRSVYPEETSKLAL-NIIIPQKDIMKIFIQWATI*EILVEFYNHXT 678
           S  +LT+  RSV     S +   NI+ P ++I K+  + A +    V FYN+ T
Sbjct: 181 SNSLLTNIRRSVNSYSFSNVKFTNIVCPNEEICKLVEESAVVKRYNVCFYNYVT 234


>Z79604-7|CAB01901.1| 1440|Caenorhabditis elegans Hypothetical
           protein ZK662.4 protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 STEILTHNLRSVYPEETSKLAL-NIIIPQKDIMKIFIQWATI*EILVEFYNHXT 678
           S  +LT+  RSV     S +   NI+ P ++I K+  + A +    V FYN+ T
Sbjct: 181 SNSLLTNIRRSVNSYSFSNVKFTNIVCPNEEICKLVEESAVVKRYNVCFYNYVT 234


>Z29967-1|CAA82854.1| 1440|Caenorhabditis elegans lin-15B protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 STEILTHNLRSVYPEETSKLAL-NIIIPQKDIMKIFIQWATI*EILVEFYNHXT 678
           S  +LT+  RSV     S +   NI+ P ++I K+  + A +    V FYN+ T
Sbjct: 181 SNSLLTNIRRSVNSYSFSNVKFTNIVCPNEEICKLVEESAVVKRYNVCFYNYVT 234


>U10413-1|AAA20089.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 STEILTHNLRSVYPEETSKLAL-NIIIPQKDIMKIFIQWATI*EILVEFYNHXT 678
           S  +LT+  RSV     S +   NI+ P ++I K+  + A +    V FYN+ T
Sbjct: 181 SNSLLTNIRRSVNSYSFSNVKFTNIVCPNEEICKLVEESAVVKRYNVCFYNYVT 234


>U10412-1|AAA20088.1| 1440|Caenorhabditis elegans lin-15B protein
           protein.
          Length = 1440

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +1

Query: 520 STEILTHNLRSVYPEETSKLAL-NIIIPQKDIMKIFIQWATI*EILVEFYNHXT 678
           S  +LT+  RSV     S +   NI+ P ++I K+  + A +    V FYN+ T
Sbjct: 181 SNSLLTNIRRSVNSYSFSNVKFTNIVCPNEEICKLVEESAVVKRYNVCFYNYVT 234


>U23177-9|AAA64327.1|  217|Caenorhabditis elegans Hypothetical
           protein C56G2.15 protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 475 CDKNIPFGFITIDKQSTEILTHNLRSVYPEETSKLALNIIIPQKD 609
           C ++ P  F+ ++K++ EIL H+  +  P     L +  ++ +KD
Sbjct: 42  CRQSPPMSFLLLNKENDEILGHSRITHLPNRDHALWIESVMIKKD 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,746,282
Number of Sequences: 27780
Number of extensions: 331437
Number of successful extensions: 789
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 789
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)