Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6n17
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032503-1|AAH32503.1| 822|Homo sapiens anaphase promoting comp... 55 2e-07
AL929554-12|CAH72881.1| 822|Homo sapiens anaphase promoting com... 55 2e-07
AF191337-1|AAF05751.1| 822|Homo sapiens anaphase-promoting comp... 55 2e-07
BC001579-1|AAH01579.1| 577|Homo sapiens ANAPC2 protein protein. 33 0.80
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 32 2.4
AB037827-1|BAA92644.1| 571|Homo sapiens KIAA1406 protein protein. 31 3.2
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 31 5.6
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 31 5.6
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 31 5.6
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 31 5.6
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 31 5.6
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 31 5.6
AB209429-1|BAD92666.1| 166|Homo sapiens integrin, beta 8 varian... 30 7.4
>BC032503-1|AAH32503.1| 822|Homo sapiens anaphase promoting complex
subunit 2 protein.
Length = 822
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 421 MCSGCGNEYSDCNCAYIVKVFHETNRKLVELQLLERLTGQVLTNFIQLRIQSHIQKVCTG 600
+C+GC ++ C C ++ FH+ ++ L L LLER++ + +T + + ++ C G
Sbjct: 220 LCAGCSSDKQQCWCRQALEQFHQLSQVLHRLSLLERVSAEAVTTTLHQVTRERMEDRCRG 279
Query: 601 TFDVSHIEALESWLNTTVMSWLIRIYCA-GSSKP 699
++ S + W+ V+ WL +++ G ++P
Sbjct: 280 EYERSFLREFHKWIE-RVVGWLGKVFLQDGPARP 312
>AL929554-12|CAH72881.1| 822|Homo sapiens anaphase promoting
complex subunit 2 protein.
Length = 822
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 421 MCSGCGNEYSDCNCAYIVKVFHETNRKLVELQLLERLTGQVLTNFIQLRIQSHIQKVCTG 600
+C+GC ++ C C ++ FH+ ++ L L LLER++ + +T + + ++ C G
Sbjct: 220 LCAGCSSDKQQCWCRQALEQFHQLSQVLHRLSLLERVSAEAVTTTLHQVTRERMEDRCRG 279
Query: 601 TFDVSHIEALESWLNTTVMSWLIRIYCA-GSSKP 699
++ S + W+ V+ WL +++ G ++P
Sbjct: 280 EYERSFLREFHKWIE-RVVGWLGKVFLQDGPARP 312
>AF191337-1|AAF05751.1| 822|Homo sapiens anaphase-promoting complex
subunit 2 protein.
Length = 822
Score = 55.2 bits (127), Expect = 2e-07
Identities = 23/94 (24%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +1
Query: 421 MCSGCGNEYSDCNCAYIVKVFHETNRKLVELQLLERLTGQVLTNFIQLRIQSHIQKVCTG 600
+C+GC ++ C C ++ FH+ ++ L L LLER++ + +T + + ++ C G
Sbjct: 220 LCAGCSSDKQQCWCRQALEQFHQLSQVLHRLSLLERVSAEAVTTTLHQVTRERMEDRCRG 279
Query: 601 TFDVSHIEALESWLNTTVMSWLIRIYCA-GSSKP 699
++ S + W+ V+ WL +++ G ++P
Sbjct: 280 EYERSFLREFHKWIE-RVVGWLGKVFLQDGPARP 312
>BC001579-1|AAH01579.1| 577|Homo sapiens ANAPC2 protein protein.
Length = 577
Score = 33.5 bits (73), Expect = 0.80
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +1
Query: 502 LVELQLLERLTGQVLTNFIQLRIQSHIQKVCTGTFDVSHIEALESWLNTTVMSWLIRIYC 681
L L LLER++ + +T + + ++ C G ++ S + W+ V+ WL +++
Sbjct: 5 LHRLSLLERVSAEAVTTTLHQVTRERMEDRCRGEYERSFLREFHKWIE-RVVGWLGKVFL 63
Query: 682 A-GSSKP 699
G ++P
Sbjct: 64 QDGPARP 70
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 31.9 bits (69), Expect = 2.4
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R+ + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRSCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>AB037827-1|BAA92644.1| 571|Homo sapiens KIAA1406 protein protein.
Length = 571
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 517 LLERLTGQVLTNFIQLRIQSHIQKVCTGTFDVSHIEALESWLNTTVMSWLIRIYCA-GSS 693
LLER++ + +T + + ++ C G ++ S + W+ V+ WL +++ G +
Sbjct: 1 LLERVSAEAVTTTLHQVTRERMEDRCRGEYERSFLREFHKWIE-RVVGWLGKVFLQDGPA 59
Query: 694 KP 699
+P
Sbjct: 60 RP 61
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 30.7 bits (66), Expect = 5.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRNCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 30.7 bits (66), Expect = 5.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRNCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 30.7 bits (66), Expect = 5.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRNCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 30.7 bits (66), Expect = 5.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRNCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 30.7 bits (66), Expect = 5.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRNCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 30.7 bits (66), Expect = 5.6
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +1
Query: 193 SFSPMLQRLTKLNSSCNDNKLIYGEKNLVLGFKQLVRATLLSQLPID-FQCIINQF--YK 363
SF P L++ K+ + +NK+ E+N+ F L R + + PI + +I + Y
Sbjct: 878 SFGPYLEQRKKIIA---ENKIRLKEQNVA--FSPLKRNCFIPKRPIPTIKDVIGKALQYL 932
Query: 364 ISFNVFDNEYENSDMGEDIMCSGCGNEYSDCN 459
+F N + M ++ MC CG Y CN
Sbjct: 933 GTFGELSNVEQVVAMIDEEMCINCGKCYMTCN 964
>AB209429-1|BAD92666.1| 166|Homo sapiens integrin, beta 8 variant
protein.
Length = 166
Score = 30.3 bits (65), Expect = 7.4
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +1
Query: 172 DLYEAVSSFSPMLQRLTKLNSSCND--NKLIYGEKNLVLGFKQLVRATLLSQLPIDFQCI 345
DLY V + M + KLNS ND K+ + ++ LGF V T+ + I + I
Sbjct: 92 DLYYLVDVSASMHNNIEKLNSVGNDLSRKMAFFSRDFRLGFGSYVDKTVSPYISIHPERI 151
Query: 346 INQFYKISFNV 378
NQ F+V
Sbjct: 152 HNQCRYPGFDV 162
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,636,667
Number of Sequences: 237096
Number of extensions: 2014152
Number of successful extensions: 3784
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3681
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3784
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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